Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH8O95206 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH8O95206 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH8O95206 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH8O95206 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH8O95206 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDH8O95206 AC006557.6-201ENST00000623071 864 ntBASIC20.27■□□□□ 0.84
PCDH8O95206 AP006294.2-201ENST00000641667 209 ntBASIC20.27■□□□□ 0.84
PCDH8O95206 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PCDH8O95206 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH8O95206 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH8O95206 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PCDH8O95206 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH8O95206 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PCDH8O95206 CLDN5-201ENST00000403084 2357 ntBASIC20.27■□□□□ 0.83
PCDH8O95206 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.27■□□□□ 0.83
PCDH8O95206 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDH8O95206 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PCDH8O95206 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PCDH8O95206 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
PCDH8O95206 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDH8O95206 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDH8O95206 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDH8O95206 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDH8O95206 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDH8O95206 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDH8O95206 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH8O95206 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH8O95206 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH8O95206 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH8O95206 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PCDH8O95206 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 POM121L13P-201ENST00000422362 380 ntBASIC20.25■□□□□ 0.83
PCDH8O95206 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PCDH8O95206 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PCDH8O95206 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH8O95206 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH8O95206 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 KRT8P36-201ENST00000489121 1440 ntBASIC20.25■□□□□ 0.83
PCDH8O95206 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH8O95206 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
PCDH8O95206 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH8O95206 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH8O95206 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH8O95206 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PCDH8O95206 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
PCDH8O95206 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDH8O95206 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDH8O95206 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDH8O95206 C1QBPP2-201ENST00000528754 825 ntBASIC20.24■□□□□ 0.83
PCDH8O95206 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH8O95206 AC005829.2-201ENST00000571422 1056 ntBASIC20.24■□□□□ 0.83
PCDH8O95206 AC233263.1-201ENST00000578059 224 ntBASIC20.24■□□□□ 0.83
PCDH8O95206 FAM197Y4-202ENST00000622692 608 ntBASIC20.24■□□□□ 0.83
PCDH8O95206 AIRN-201ENST00000601203 4374 ntBASIC20.24■□□□□ 0.83
PCDH8O95206 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH8O95206 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH8O95206 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH8O95206 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH8O95206 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH8O95206 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH8O95206 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH8O95206 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH8O95206 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH8O95206 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH8O95206 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms