Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
BEST1O76090 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BEST1O76090 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BEST1O76090 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.33■■□□□ 1.01
BEST1O76090 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BEST1O76090 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.33■■□□□ 1.01
BEST1O76090 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.33■■□□□ 1.01
BEST1O76090 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.33■■□□□ 1.01
BEST1O76090 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
BEST1O76090 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
BEST1O76090 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
BEST1O76090 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
BEST1O76090 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 AC008403.3-201ENST00000598924 454 ntBASIC21.32■■□□□ 1
BEST1O76090 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.32■■□□□ 1
BEST1O76090 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BEST1O76090 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.31■■□□□ 1
BEST1O76090 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
BEST1O76090 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.31■■□□□ 1
BEST1O76090 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.31■■□□□ 1
BEST1O76090 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.31■■□□□ 1
BEST1O76090 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.31■■□□□ 1
BEST1O76090 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BEST1O76090 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.31■■□□□ 1
BEST1O76090 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
BEST1O76090 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
BEST1O76090 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.3■■□□□ 1
BEST1O76090 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.3■■□□□ 1
BEST1O76090 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.3■■□□□ 1
BEST1O76090 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEST1O76090 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
BEST1O76090 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
BEST1O76090 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEST1O76090 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEST1O76090 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEST1O76090 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEST1O76090 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEST1O76090 ESRRAP1-201ENST00000400596 1257 ntBASIC21.3■■□□□ 1
BEST1O76090 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.3■■□□□ 1
BEST1O76090 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.3■■□□□ 1
BEST1O76090 POU5F1P3-201ENST00000428824 1078 ntBASIC21.3■■□□□ 1
BEST1O76090 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.3■■□□□ 1
BEST1O76090 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.3■■□□□ 1
BEST1O76090 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.3■■□□□ 1
BEST1O76090 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.3■■□□□ 1
BEST1O76090 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.3■■□□□ 1
BEST1O76090 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.3■■□□□ 1
BEST1O76090 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.3■■□□□ 1
BEST1O76090 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.3■■□□□ 1
BEST1O76090 PTBP1P-201ENST00000554374 1601 ntBASIC21.29■■□□□ 1
BEST1O76090 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
BEST1O76090 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BEST1O76090 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.29■■□□□ 1
BEST1O76090 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.29■■□□□ 1
BEST1O76090 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BEST1O76090 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
BEST1O76090 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.29■■□□□ 1
BEST1O76090 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.29■■□□□ 1
BEST1O76090 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.29■■□□□ 1
BEST1O76090 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.29■■□□□ 1
BEST1O76090 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.29■■□□□ 1
BEST1O76090 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
BEST1O76090 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.29■■□□□ 1
BEST1O76090 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
BEST1O76090 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.29■■□□□ 1
BEST1O76090 AC073314.1-201ENST00000568729 2216 ntBASIC21.29■■□□□ 1
BEST1O76090 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BEST1O76090 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.29■■□□□ 1
BEST1O76090 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
BEST1O76090 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.28■■□□□ 1
BEST1O76090 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.28■■□□□ 1
BEST1O76090 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEST1O76090 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEST1O76090 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
BEST1O76090 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.28■■□□□ 1
BEST1O76090 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BEST1O76090 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms