Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDKL5O76039 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
CDKL5O76039 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDKL5O76039 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
CDKL5O76039 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.58■■□□□ 1.37
CDKL5O76039 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDKL5O76039 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDKL5O76039 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDKL5O76039 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDKL5O76039 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
CDKL5O76039 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDKL5O76039 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDKL5O76039 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDKL5O76039 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDKL5O76039 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDKL5O76039 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDKL5O76039 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDKL5O76039 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 AC073130.3-201ENST00000624389 2278 ntBASIC23.57■■□□□ 1.36
CDKL5O76039 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.57■■□□□ 1.36
CDKL5O76039 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.57■■□□□ 1.36
CDKL5O76039 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
CDKL5O76039 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDKL5O76039 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CDKL5O76039 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.56■■□□□ 1.36
CDKL5O76039 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.56■■□□□ 1.36
CDKL5O76039 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 KRT18P68-201ENST00000392293 1000 ntBASIC23.56■■□□□ 1.36
CDKL5O76039 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.56■■□□□ 1.36
CDKL5O76039 AL512625.2-201ENST00000417533 625 ntBASIC23.56■■□□□ 1.36
CDKL5O76039 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.56■■□□□ 1.36
CDKL5O76039 CDCA4P2-201ENST00000441182 718 ntBASIC23.56■■□□□ 1.36
CDKL5O76039 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.56■■□□□ 1.36
CDKL5O76039 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
CDKL5O76039 CYP2T3P-201ENST00000601990 817 ntBASIC23.56■■□□□ 1.36
CDKL5O76039 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CDKL5O76039 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDKL5O76039 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.56■■□□□ 1.36
CDKL5O76039 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CDKL5O76039 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
CDKL5O76039 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDKL5O76039 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.55■■□□□ 1.36
CDKL5O76039 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDKL5O76039 DPP3P2-201ENST00000416030 1696 ntBASIC23.55■■□□□ 1.36
CDKL5O76039 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDKL5O76039 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.55■■□□□ 1.36
CDKL5O76039 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.55■■□□□ 1.36
CDKL5O76039 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDKL5O76039 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.55■■□□□ 1.36
CDKL5O76039 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDKL5O76039 AC105020.6-201ENST00000621523 1217 ntBASIC23.55■■□□□ 1.36
CDKL5O76039 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDKL5O76039 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.55■■□□□ 1.36
CDKL5O76039 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CDKL5O76039 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
CDKL5O76039 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
CDKL5O76039 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
CDKL5O76039 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.55■■□□□ 1.36
CDKL5O76039 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDKL5O76039 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.54■■□□□ 1.36
CDKL5O76039 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDKL5O76039 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.54■■□□□ 1.36
CDKL5O76039 AC010980.2-201ENST00000587099 1412 ntBASIC23.54■■□□□ 1.36
CDKL5O76039 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDKL5O76039 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.54■■□□□ 1.36
CDKL5O76039 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDKL5O76039 AC026185.1-201ENST00000445748 174 ntBASIC23.54■■□□□ 1.36
CDKL5O76039 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDKL5O76039 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.54■■□□□ 1.36
CDKL5O76039 AC133552.2-202ENST00000575694 574 ntBASIC23.54■■□□□ 1.36
CDKL5O76039 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDKL5O76039 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDKL5O76039 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDKL5O76039 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
CDKL5O76039 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.54■■□□□ 1.36
CDKL5O76039 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.54■■□□□ 1.36
CDKL5O76039 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CDKL5O76039 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDKL5O76039 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.53■■□□□ 1.36
CDKL5O76039 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CDKL5O76039 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
CDKL5O76039 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms