Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTP4A3O75365 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A3O75365 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTP4A3O75365 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A3O75365 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A3O75365 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A3O75365 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.26■□□□□ 0.51
PTP4A3O75365 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.26■□□□□ 0.51
PTP4A3O75365 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.26■□□□□ 0.51
PTP4A3O75365 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTP4A3O75365 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A3O75365 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.26■□□□□ 0.51
PTP4A3O75365 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A3O75365 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A3O75365 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.25■□□□□ 0.51
PTP4A3O75365 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PTP4A3O75365 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A3O75365 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A3O75365 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.25■□□□□ 0.51
PTP4A3O75365 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTP4A3O75365 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.25■□□□□ 0.51
PTP4A3O75365 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A3O75365 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A3O75365 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.25■□□□□ 0.51
PTP4A3O75365 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTP4A3O75365 MYCNOS-205ENST00000641950 531 ntBASIC18.25■□□□□ 0.51
PTP4A3O75365 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.25■□□□□ 0.51
PTP4A3O75365 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A3O75365 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PTP4A3O75365 AC125437.2-201ENST00000625180 2167 ntBASIC18.25■□□□□ 0.51
PTP4A3O75365 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A3O75365 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A3O75365 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A3O75365 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PTP4A3O75365 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A3O75365 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
PTP4A3O75365 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.24■□□□□ 0.51
PTP4A3O75365 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.24■□□□□ 0.51
PTP4A3O75365 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PTP4A3O75365 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.24■□□□□ 0.51
PTP4A3O75365 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTP4A3O75365 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.24■□□□□ 0.51
PTP4A3O75365 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTP4A3O75365 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.24■□□□□ 0.51
PTP4A3O75365 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.24■□□□□ 0.51
PTP4A3O75365 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTP4A3O75365 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.24■□□□□ 0.51
PTP4A3O75365 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.24■□□□□ 0.51
PTP4A3O75365 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A3O75365 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A3O75365 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.23■□□□□ 0.51
PTP4A3O75365 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A3O75365 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A3O75365 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.23■□□□□ 0.51
PTP4A3O75365 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A3O75365 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.23■□□□□ 0.51
PTP4A3O75365 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.23■□□□□ 0.51
PTP4A3O75365 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PTP4A3O75365 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A3O75365 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.23■□□□□ 0.51
PTP4A3O75365 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A3O75365 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTP4A3O75365 TERF1P5-201ENST00000477545 1207 ntBASIC18.23■□□□□ 0.51
PTP4A3O75365 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.23■□□□□ 0.51
PTP4A3O75365 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.23■□□□□ 0.51
PTP4A3O75365 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.23■□□□□ 0.51
PTP4A3O75365 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A3O75365 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PTP4A3O75365 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A3O75365 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A3O75365 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A3O75365 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A3O75365 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A3O75365 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.22■□□□□ 0.51
PTP4A3O75365 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A3O75365 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A3O75365 AL691432.2-201ENST00000607222 2038 ntBASIC18.22■□□□□ 0.51
PTP4A3O75365 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A3O75365 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.22■□□□□ 0.51
PTP4A3O75365 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PTP4A3O75365 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms