Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.15■□□□□ 0.34
KCNAB3O43448 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.15■□□□□ 0.34
KCNAB3O43448 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.14■□□□□ 0.34
KCNAB3O43448 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNAB3O43448 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.14■□□□□ 0.33
KCNAB3O43448 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNAB3O43448 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
KCNAB3O43448 AC018445.3-201ENST00000624177 1945 ntBASIC17.14■□□□□ 0.33
KCNAB3O43448 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.14■□□□□ 0.33
KCNAB3O43448 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
KCNAB3O43448 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNAB3O43448 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.14■□□□□ 0.33
KCNAB3O43448 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.14■□□□□ 0.33
KCNAB3O43448 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.14■□□□□ 0.33
KCNAB3O43448 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.14■□□□□ 0.33
KCNAB3O43448 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
KCNAB3O43448 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNAB3O43448 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNAB3O43448 AL512408.1-201ENST00000569378 2000 ntBASIC17.14■□□□□ 0.33
KCNAB3O43448 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.14■□□□□ 0.33
KCNAB3O43448 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.14■□□□□ 0.33
KCNAB3O43448 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.14■□□□□ 0.33
KCNAB3O43448 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNAB3O43448 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNAB3O43448 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
KCNAB3O43448 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
KCNAB3O43448 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNAB3O43448 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNAB3O43448 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KCNAB3O43448 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.13■□□□□ 0.33
KCNAB3O43448 AC020907.5-201ENST00000624372 1936 ntBASIC17.13■□□□□ 0.33
KCNAB3O43448 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 OR7E47P-201ENST00000546390 1422 ntBASIC17.13■□□□□ 0.33
KCNAB3O43448 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.13■□□□□ 0.33
KCNAB3O43448 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
KCNAB3O43448 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.13■□□□□ 0.33
KCNAB3O43448 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.13■□□□□ 0.33
KCNAB3O43448 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.13■□□□□ 0.33
KCNAB3O43448 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
KCNAB3O43448 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.13■□□□□ 0.33
KCNAB3O43448 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.13■□□□□ 0.33
KCNAB3O43448 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.13■□□□□ 0.33
KCNAB3O43448 AC137761.2-201ENST00000561729 223 ntBASIC17.13■□□□□ 0.33
KCNAB3O43448 AC145350.3-201ENST00000569033 163 ntBASIC17.13■□□□□ 0.33
KCNAB3O43448 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.13■□□□□ 0.33
KCNAB3O43448 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.13■□□□□ 0.33
KCNAB3O43448 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.13■□□□□ 0.33
KCNAB3O43448 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.13■□□□□ 0.33
KCNAB3O43448 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KCNAB3O43448 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KCNAB3O43448 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNAB3O43448 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
KCNAB3O43448 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNAB3O43448 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KCNAB3O43448 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KCNAB3O43448 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.12■□□□□ 0.33
KCNAB3O43448 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.12■□□□□ 0.33
KCNAB3O43448 AL034346.1-201ENST00000568244 1277 ntBASIC17.12■□□□□ 0.33
KCNAB3O43448 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KCNAB3O43448 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNAB3O43448 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.12■□□□□ 0.33
KCNAB3O43448 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.12■□□□□ 0.33
KCNAB3O43448 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNAB3O43448 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.12■□□□□ 0.33
KCNAB3O43448 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KCNAB3O43448 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KCNAB3O43448 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNAB3O43448 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNAB3O43448 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNAB3O43448 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.11■□□□□ 0.33
KCNAB3O43448 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNAB3O43448 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
KCNAB3O43448 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
KCNAB3O43448 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNAB3O43448 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNAB3O43448 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KCNAB3O43448 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNAB3O43448 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNAB3O43448 GPX1P1-201ENST00000388829 606 ntBASIC17.11■□□□□ 0.33
KCNAB3O43448 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNAB3O43448 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.11■□□□□ 0.33
KCNAB3O43448 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
KCNAB3O43448 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KCNAB3O43448 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.11■□□□□ 0.33
KCNAB3O43448 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KCNAB3O43448 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms