Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN4O14493 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.09■□□□□ 0.65
CLDN4O14493 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN4O14493 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN4O14493 AC091874.3-201ENST00000512672 1195 ntBASIC19.09■□□□□ 0.65
CLDN4O14493 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDN4O14493 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CLDN4O14493 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDN4O14493 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN4O14493 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN4O14493 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN4O14493 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN4O14493 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLDN4O14493 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN4O14493 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN4O14493 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN4O14493 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN4O14493 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN4O14493 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN4O14493 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN4O14493 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN4O14493 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.08■□□□□ 0.65
CLDN4O14493 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CLDN4O14493 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN4O14493 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.08■□□□□ 0.64
CLDN4O14493 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN4O14493 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN4O14493 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN4O14493 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.08■□□□□ 0.64
CLDN4O14493 AL121603.2-201ENST00000557373 2117 ntBASIC19.08■□□□□ 0.64
CLDN4O14493 C2orf69P4-201ENST00000565394 541 ntBASIC19.08■□□□□ 0.64
CLDN4O14493 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN4O14493 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN4O14493 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CLDN4O14493 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CLDN4O14493 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN4O14493 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.07■□□□□ 0.64
CLDN4O14493 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.07■□□□□ 0.64
CLDN4O14493 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.07■□□□□ 0.64
CLDN4O14493 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLDN4O14493 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN4O14493 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN4O14493 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN4O14493 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN4O14493 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN4O14493 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN4O14493 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLDN4O14493 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN4O14493 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLDN4O14493 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN4O14493 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN4O14493 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN4O14493 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN4O14493 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLDN4O14493 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN4O14493 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN4O14493 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 AC092720.2-201ENST00000602388 1665 ntBASIC19.05■□□□□ 0.64
CLDN4O14493 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLDN4O14493 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLDN4O14493 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.05■□□□□ 0.64
CLDN4O14493 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CLDN4O14493 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLDN4O14493 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN4O14493 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN4O14493 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN4O14493 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms