Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 CFTRP2-201ENST00000634304 199 ntBASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SPDYE4A6NLX3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 AL845331.1-201ENST00000424978 1190 ntBASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 AP003400.6-201ENST00000624698 740 ntBASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 AC133041.1-202ENST00000642053 222 ntBASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SPDYE4A6NLX3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SPDYE4A6NLX3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.22
SPDYE4A6NLX3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.64■■□□□ 1.22
SPDYE4A6NLX3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SPDYE4A6NLX3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SPDYE4A6NLX3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.64■■□□□ 1.22
SPDYE4A6NLX3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SPDYE4A6NLX3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SPDYE4A6NLX3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SPDYE4A6NLX3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SPDYE4A6NLX3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SPDYE4A6NLX3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.64■■□□□ 1.21
SPDYE4A6NLX3 AC079089.2-201ENST00000531211 1277 ntBASIC22.64■■□□□ 1.21
SPDYE4A6NLX3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPDYE4A6NLX3 AC010536.3-201ENST00000620306 533 ntBASIC22.64■■□□□ 1.21
SPDYE4A6NLX3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SPDYE4A6NLX3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPDYE4A6NLX3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 LETM1P2-201ENST00000597330 2178 ntBASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 AC069152.1-201ENST00000438030 544 ntBASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 GUSBP6-202ENST00000438529 1198 ntBASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 AC055733.4-201ENST00000638462 1354 ntBASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SPDYE4A6NLX3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 AC098818.2-201ENST00000564925 2320 ntBASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 AC010141.2-201ENST00000452426 721 ntBASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SPDYE4A6NLX3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 OR7E47P-201ENST00000546390 1422 ntBASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 AC066615.1-201ENST00000640911 628 ntBASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SPDYE4A6NLX3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms