Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 CLEC4GP1-201ENST00000596555 870 ntBASIC19.52■□□□□ 0.72
CNOT1A5YKK6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 AL390719.1-204ENST00000412397 1219 ntBASIC19.52■□□□□ 0.72
CNOT1A5YKK6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 AC026271.3-201ENST00000571884 352 ntBASIC19.52■□□□□ 0.72
CNOT1A5YKK6 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNOT1A5YKK6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNOT1A5YKK6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNOT1A5YKK6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.52■□□□□ 0.71
CNOT1A5YKK6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNOT1A5YKK6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.52■□□□□ 0.71
CNOT1A5YKK6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CNOT1A5YKK6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 ECEL1P2-202ENST00000465689 757 ntBASIC19.51■□□□□ 0.71
CNOT1A5YKK6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT1A5YKK6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 PGM5P4-201ENST00000421970 445 ntBASIC19.5■□□□□ 0.71
CNOT1A5YKK6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 NIFKP9-201ENST00000419265 221 ntBASIC19.5■□□□□ 0.71
CNOT1A5YKK6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT1A5YKK6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT1A5YKK6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 RNF152P1-201ENST00000397754 604 ntBASIC19.48■□□□□ 0.71
CNOT1A5YKK6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 YBX1P2-201ENST00000489612 999 ntBASIC19.48■□□□□ 0.71
CNOT1A5YKK6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CNOT1A5YKK6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 KRT8P10-201ENST00000450021 1447 ntBASIC19.47■□□□□ 0.71
CNOT1A5YKK6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNOT1A5YKK6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms