Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TCRBV5S1A1TA0A578 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 CROCCP5-201ENST00000436658 830 ntBASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV5S1A1TA0A578 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV5S1A1TA0A578 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 KRT17P1-201ENST00000399211 1546 ntBASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 AC026185.1-201ENST00000445748 174 ntBASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 AC008694.1-202ENST00000636953 945 ntBASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.21■□□□□ 0.99
TCRBV5S1A1TA0A578 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.2■□□□□ 0.98
TCRBV5S1A1TA0A578 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 BX119927.1-201ENST00000636596 1552 ntBASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV5S1A1TA0A578 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms