Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 NPSR1-202ENST00000360581 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AL359396.1-201ENST00000623151 2376 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 RGS17-201ENST00000206262 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC073349.2-201ENST00000427545 1603 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 CRYGA-201ENST00000304502 609 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AL031864.1-201ENST00000392075 423 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 EPPIN-203ENST00000409554 998 ntTSL 5 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 RN7SKP154-201ENST00000410136 290 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 RPL21P107-201ENST00000411449 460 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 RPL26P34-201ENST00000431005 451 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 AL359541.1-201ENST00000431097 575 ntTSL 3 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 DSCR10-201ENST00000432141 860 ntTSL 3 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 CYP2C58P-201ENST00000436281 475 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AL096855.1-201ENST00000449895 516 ntTSL 3 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 PGA5-202ENST00000451616 971 ntTSL 2 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC096915.1-201ENST00000456185 512 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC026798.1-201ENST00000468490 482 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 RN7SL418P-201ENST00000473031 287 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 LINC00544-202ENST00000481738 575 ntTSL 3 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC068531.1-201ENST00000502398 195 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 GUSBP3-201ENST00000509348 423 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 HEXB-205ENST00000509579 806 ntTSL 2 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 MIR3945HG-202ENST00000511703 729 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC093281.1-201ENST00000514239 549 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 STMN2-203ENST00000518491 585 ntTSL 2 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 EIF4EP5-201ENST00000528228 640 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC022880.2-201ENST00000532664 270 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC044839.4-201ENST00000534128 469 ntTSL 3 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 NBPF5P-202ENST00000545941 1032 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 CYP4A44P-201ENST00000569984 154 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 RN7SL353P-201ENST00000579902 252 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 LINC00635-210ENST00000600240 714 ntTSL 5 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AL132821.1-201ENST00000616029 394 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AC018880.1-201ENST00000418898 1319 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 EIF3EP2-201ENST00000423042 1814 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 ADGRF1-202ENST00000371243 1370 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 AL096816.1-201ENST00000623300 2920 ntBASIC7.68□□□□□ -1.18
SNX18Q96RF0 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 ODF2L-213ENST00000478286 1650 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 AC010886.1-201ENST00000437380 2869 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 RNA5SP74-201ENST00000363538 109 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 ATG10-IT1-201ENST00000396880 487 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 ZNF839P1-201ENST00000403487 861 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 AL133216.1-201ENST00000428915 727 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 TPTE2P1-204ENST00000435256 593 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms