Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SLC1A1P43005 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SLC1A1P43005 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SLC1A1P43005 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC8.64□□□□□ -1.03
SLC1A1P43005 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 RBP2-201ENST00000232217 694 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 MIR345-201ENST00000362114 98 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 PSMD10-205ENST00000372295 779 ntTSL 5 BASIC8.64□□□□□ -1.03
SLC1A1P43005 MIR197-201ENST00000384976 75 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SLC1A1P43005 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SLC1A1P43005 MT1X-201ENST00000394485 450 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 AL032822.1-201ENST00000405827 1063 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 AP001116.1-201ENST00000421604 762 ntTSL 3 BASIC8.64□□□□□ -1.03
SLC1A1P43005 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 HSPB1P1-201ENST00000423240 256 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 SLC8A1-AS1-204ENST00000427354 790 ntTSL 3 BASIC8.64□□□□□ -1.03
SLC1A1P43005 RN7SL841P-201ENST00000470547 297 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.64□□□□□ -1.03
SLC1A1P43005 RN7SL448P-201ENST00000475566 295 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 RN7SL302P-201ENST00000475999 300 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 RN7SL745P-201ENST00000484900 299 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 CFL1P5-201ENST00000508046 502 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 AC073896.2-201ENST00000549565 399 ntTSL 2 BASIC8.64□□□□□ -1.03
SLC1A1P43005 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 HP-207ENST00000562526 685 ntTSL 3 BASIC8.64□□□□□ -1.03
SLC1A1P43005 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC8.64□□□□□ -1.03
SLC1A1P43005 WWOX-AS1-201ENST00000567099 443 ntTSL 5 BASIC8.64□□□□□ -1.03
SLC1A1P43005 EIF4A1P9-201ENST00000576035 1207 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 AC124319.3-201ENST00000616832 526 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC8.64□□□□□ -1.03
SLC1A1P43005 AC104447.1-201ENST00000624214 2124 ntBASIC8.64□□□□□ -1.03
SLC1A1P43005 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.64□□□□□ -1.03
SLC1A1P43005 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SLC1A1P43005 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SLC1A1P43005 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 STAU2-AS1-201ENST00000517604 2076 ntTSL 2 BASIC8.64□□□□□ -1.03
SLC1A1P43005 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SLC1A1P43005 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.64□□□□□ -1.03
SLC1A1P43005 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SLC1A1P43005 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.64□□□□□ -1.03
SLC1A1P43005 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC8.64□□□□□ -1.03
SLC1A1P43005 AC009061.2-203ENST00000635000 1462 ntTSL 5 BASIC8.64□□□□□ -1.03
SLC1A1P43005 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SLC1A1P43005 AL353807.3-201ENST00000500626 2505 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8.63□□□□□ -1.03
SLC1A1P43005 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.63□□□□□ -1.03
SLC1A1P43005 SPATA7-201ENST00000045347 1410 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
SLC1A1P43005 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.63□□□□□ -1.03
SLC1A1P43005 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.63□□□□□ -1.03
SLC1A1P43005 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.63□□□□□ -1.03
SLC1A1P43005 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 AC131935.2-201ENST00000623649 1371 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 TARS2P1-201ENST00000506124 2041 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SLC1A1P43005 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.63□□□□□ -1.03
SLC1A1P43005 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 AL121835.2-201ENST00000624253 3502 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 IL26-201ENST00000229134 1075 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 AHCYP5-201ENST00000331585 1238 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 Z93930.2-202ENST00000418292 208 ntTSL 3 BASIC8.63□□□□□ -1.03
SLC1A1P43005 WRBP1-201ENST00000423352 334 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SLC1A1P43005 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.63□□□□□ -1.03
SLC1A1P43005 RPL12P8-201ENST00000482081 580 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 SMIM19-205ENST00000490331 487 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
SLC1A1P43005 AC095050.1-201ENST00000502661 905 ntTSL 5 BASIC8.63□□□□□ -1.03
SLC1A1P43005 OR4C9P-201ENST00000532368 925 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 STXBP6-204ENST00000546511 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 AC012157.1-201ENST00000549725 501 ntTSL 4 BASIC8.63□□□□□ -1.03
SLC1A1P43005 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC8.63□□□□□ -1.03
SLC1A1P43005 APOOP5-202ENST00000564761 566 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 IGHV3OR16-15-201ENST00000565463 414 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 AC112484.4-201ENST00000567253 811 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 VN1R67P-201ENST00000568379 913 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 AC015818.5-201ENST00000578659 356 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC8.63□□□□□ -1.03
SLC1A1P43005 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC8.63□□□□□ -1.03
SLC1A1P43005 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC8.63□□□□□ -1.03
SLC1A1P43005 RHOXF1P2-201ENST00000635431 502 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 LINC02211-202ENST00000641091 839 ntBASIC8.63□□□□□ -1.03
SLC1A1P43005 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
SLC1A1P43005 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
SLC1A1P43005 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
SLC1A1P43005 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SLC1A1P43005 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms