Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RN7SL598P-201ENST00000494391 294 ntBASIC8.7□□□□□ -1.02
SLC1A1P43005 CASC8-201ENST00000501396 930 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SLC1A1P43005 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC8.7□□□□□ -1.02
SLC1A1P43005 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8.7□□□□□ -1.02
SLC1A1P43005 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SLC1A1P43005 AC020892.2-201ENST00000557891 387 ntTSL 3 BASIC8.7□□□□□ -1.02
SLC1A1P43005 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.7□□□□□ -1.02
SLC1A1P43005 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC8.7□□□□□ -1.02
SLC1A1P43005 RN7SL619P-201ENST00000581753 258 ntBASIC8.7□□□□□ -1.02
SLC1A1P43005 AC015878.2-201ENST00000584331 361 ntTSL 5 BASIC8.7□□□□□ -1.02
SLC1A1P43005 AC073534.1-201ENST00000598671 1056 ntBASIC8.7□□□□□ -1.02
SLC1A1P43005 AC010680.2-201ENST00000603521 2117 ntBASIC8.7□□□□□ -1.02
SLC1A1P43005 AC005185.1-201ENST00000604248 787 ntBASIC8.7□□□□□ -1.02
SLC1A1P43005 REST-209ENST00000622863 1106 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SLC1A1P43005 MIR3191-201ENST00000636300 76 ntBASIC8.7□□□□□ -1.02
SLC1A1P43005 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SLC1A1P43005 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.7□□□□□ -1.02
SLC1A1P43005 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SLC1A1P43005 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.7□□□□□ -1.02
SLC1A1P43005 EIF4BP2-201ENST00000416702 1794 ntBASIC8.7□□□□□ -1.02
SLC1A1P43005 LEAP2-201ENST00000296877 2207 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SLC1A1P43005 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC8.7□□□□□ -1.02
SLC1A1P43005 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
SLC1A1P43005 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SLC1A1P43005 FO393409.1-201ENST00000399325 1372 ntBASIC8.7□□□□□ -1.02
SLC1A1P43005 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
SLC1A1P43005 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SLC1A1P43005 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.7□□□□□ -1.02
SLC1A1P43005 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SLC1A1P43005 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
SLC1A1P43005 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.69□□□□□ -1.02
SLC1A1P43005 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.69□□□□□ -1.02
SLC1A1P43005 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
SLC1A1P43005 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
SLC1A1P43005 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
SLC1A1P43005 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC8.69□□□□□ -1.02
SLC1A1P43005 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC8.69□□□□□ -1.02
SLC1A1P43005 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 SNORA57.2-201ENST00000391265 128 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 KRTAP9-1-201ENST00000398470 753 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 ANXA2P3-201ENST00000404883 1008 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 SNORA73.3-201ENST00000410213 189 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC8.69□□□□□ -1.02
SLC1A1P43005 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC8.69□□□□□ -1.02
SLC1A1P43005 CD59-204ENST00000426650 741 ntAPPRIS P2 TSL 3 BASIC8.69□□□□□ -1.02
SLC1A1P43005 RNF212B-203ENST00000430154 903 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
SLC1A1P43005 AL441943.1-201ENST00000435539 432 ntTSL 3 BASIC8.69□□□□□ -1.02
SLC1A1P43005 TBL1YP1-201ENST00000440297 1026 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 LINC00445-202ENST00000456848 643 ntTSL 3 BASIC8.69□□□□□ -1.02
SLC1A1P43005 RN7SL706P-201ENST00000460079 292 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 AC112203.1-201ENST00000506315 1020 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 RASA2-IT1-201ENST00000507770 612 ntTSL 3 BASIC8.69□□□□□ -1.02
SLC1A1P43005 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC8.69□□□□□ -1.02
SLC1A1P43005 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC8.69□□□□□ -1.02
SLC1A1P43005 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.69□□□□□ -1.02
SLC1A1P43005 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC8.69□□□□□ -1.02
SLC1A1P43005 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC8.69□□□□□ -1.02
SLC1A1P43005 AC087639.1-201ENST00000560974 920 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 AC018554.2-201ENST00000563482 261 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC8.69□□□□□ -1.02
SLC1A1P43005 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC8.69□□□□□ -1.02
SLC1A1P43005 AC015911.8-201ENST00000592517 560 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC8.69□□□□□ -1.02
SLC1A1P43005 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
SLC1A1P43005 OLMALINC-206ENST00000641799 1195 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
SLC1A1P43005 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC8.69□□□□□ -1.02
SLC1A1P43005 AC091132.4-201ENST00000587960 2262 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SLC1A1P43005 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
SLC1A1P43005 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC8.69□□□□□ -1.02
SLC1A1P43005 AC105046.1-201ENST00000566457 4997 ntBASIC8.69□□□□□ -1.02
SLC1A1P43005 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.68□□□□□ -1.02
SLC1A1P43005 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.68□□□□□ -1.02
SLC1A1P43005 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SLC1A1P43005 NRG1-209ENST00000519301 1785 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
SLC1A1P43005 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.68□□□□□ -1.02
SLC1A1P43005 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SLC1A1P43005 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SLC1A1P43005 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC8.68□□□□□ -1.02
SLC1A1P43005 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.68□□□□□ -1.02
SLC1A1P43005 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.68□□□□□ -1.02
SLC1A1P43005 CLYBL-201ENST00000339105 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SLC1A1P43005 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC8.68□□□□□ -1.02
SLC1A1P43005 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms