Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL139805.2-201ENST00000455305 2433 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 MAPK10-377ENST00000642006 2752 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 MAPK10-329ENST00000641555 2656 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 OR4C15-201ENST00000314644 1113 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 TAGAP-202ENST00000338313 1183 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 MSR1-203ENST00000355282 1167 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 RN7SKP173-201ENST00000362821 315 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 FAM209B-201ENST00000371325 694 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 UST-AS1-201ENST00000413845 714 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 OR7E36P-201ENST00000419933 954 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC016027.1-201ENST00000426483 805 ntTSL 3 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 FTH1P20-201ENST00000434913 548 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 MICC-201ENST00000445710 1055 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 GAPDHP45-201ENST00000452090 349 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 RN7SL63P-201ENST00000468228 304 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 RN7SL700P-201ENST00000496982 294 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 MRPS28-207ENST00000521434 585 ntTSL 5 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 LRTOMT-216ENST00000539271 570 ntTSL 4 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC078865.1-201ENST00000547174 562 ntTSL 4 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC113146.1-201ENST00000558255 696 ntTSL 3 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC034105.5-201ENST00000564017 314 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 U62631.1-201ENST00000597110 435 ntTSL 3 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 Metazoa_SRP.98-201ENST00000610878 274 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC005086.2-201ENST00000624939 228 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 MIR3976HG-202ENST00000566533 1690 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AC018992.1-201ENST00000523778 2149 ntBASIC7.75□□□□□ -1.17
SNX18Q96RF0 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNX18Q96RF0 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SNX18Q96RF0 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 EXOSC9-211ENST00000512454 1543 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 DCLRE1C-205ENST00000378249 2246 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC211476.4-201ENST00000275546 699 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 SNORA58.1-201ENST00000364133 136 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNX18Q96RF0 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 PMS2P5-201ENST00000398065 516 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 CAPNS1P1-201ENST00000401029 633 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 FANCL-204ENST00000403676 849 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 FABP5P10-201ENST00000435729 408 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 RPS29P3-201ENST00000439929 171 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 ZEB1-AS1-203ENST00000441257 585 ntTSL 2 BASIC7.74□□□□□ -1.17
SNX18Q96RF0 AC007237.1-201ENST00000442074 499 ntBASIC7.74□□□□□ -1.17
SNX18Q96RF0 CYP4F25P-201ENST00000446871 520 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms