Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.82■■□□□ 1.4
SMC3Q9UQE7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.82■■□□□ 1.4
SMC3Q9UQE7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 AC007322.3-201ENST00000426526 701 ntBASIC23.81■■□□□ 1.4
SMC3Q9UQE7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SMC3Q9UQE7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 SLC7A5P1-201ENST00000568957 537 ntBASIC23.8■■□□□ 1.4
SMC3Q9UQE7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC3Q9UQE7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 AC019069.1-201ENST00000610008 1333 ntBASIC23.79■■□□□ 1.4
SMC3Q9UQE7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.79■■□□□ 1.4
SMC3Q9UQE7 KRT8P36-201ENST00000489121 1440 ntBASIC23.78■■□□□ 1.4
SMC3Q9UQE7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
SMC3Q9UQE7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 AC007952.6-201ENST00000573168 2673 ntBASIC23.77■■□□□ 1.4
SMC3Q9UQE7 AC003957.1-201ENST00000625108 2673 ntBASIC23.77■■□□□ 1.4
SMC3Q9UQE7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMC3Q9UQE7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMC3Q9UQE7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMC3Q9UQE7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms