Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF38Q9NXL2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF38Q9NXL2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.12■□□□□ 0.97
ARHGEF38Q9NXL2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ARHGEF38Q9NXL2 LSM12P1-201ENST00000411836 588 ntBASIC21.12■□□□□ 0.97
ARHGEF38Q9NXL2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ARHGEF38Q9NXL2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF38Q9NXL2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
ARHGEF38Q9NXL2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.12■□□□□ 0.97
ARHGEF38Q9NXL2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF38Q9NXL2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 AC073210.2-201ENST00000430369 194 ntBASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 MIR4758-201ENST00000577688 71 ntBASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF38Q9NXL2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 AL355802.2-201ENST00000402069 882 ntBASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF38Q9NXL2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 AC098934.4-201ENST00000564127 592 ntBASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
ARHGEF38Q9NXL2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ARHGEF38Q9NXL2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.08■□□□□ 0.96
ARHGEF38Q9NXL2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
ARHGEF38Q9NXL2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ARHGEF38Q9NXL2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ARHGEF38Q9NXL2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 AC069152.1-201ENST00000438030 544 ntBASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF38Q9NXL2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms