Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 AL356652.1-201ENST00000615962 565 ntBASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
PRDM9Q9NQV7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 AC092720.2-201ENST00000602388 1665 ntBASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 LINC01521-201ENST00000504184 1943 ntBASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 AC020907.5-201ENST00000624372 1936 ntBASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 AC105020.6-201ENST00000621523 1217 ntBASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRDM9Q9NQV7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.17■□□□□ 0.66
PRDM9Q9NQV7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 AL121603.2-201ENST00000557373 2117 ntBASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 AC098934.4-201ENST00000564127 592 ntBASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRDM9Q9NQV7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRDM9Q9NQV7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms