Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDK5RAP1Q96SZ6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 ITM2C-210ENST00000620962 501 ntBASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
CDK5RAP1Q96SZ6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 AL390719.1-204ENST00000412397 1219 ntBASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.11■□□□□ 0.97
CDK5RAP1Q96SZ6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 UNC93B4-201ENST00000505679 747 ntBASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 AC005829.2-201ENST00000571422 1056 ntBASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDK5RAP1Q96SZ6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 KRT18P29-201ENST00000397031 1267 ntBASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDK5RAP1Q96SZ6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 AC023632.3-201ENST00000521633 145 ntBASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDK5RAP1Q96SZ6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDK5RAP1Q96SZ6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDK5RAP1Q96SZ6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.08■□□□□ 0.96
CDK5RAP1Q96SZ6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDK5RAP1Q96SZ6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDK5RAP1Q96SZ6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP1Q96SZ6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK5RAP1Q96SZ6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP1Q96SZ6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.07■□□□□ 0.96
CDK5RAP1Q96SZ6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP1Q96SZ6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK5RAP1Q96SZ6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms