Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.56■□□□□ 0.4
HIST1H2AAQ96QV6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 LINC01006-201ENST00000333319 2292 ntBASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 AC091799.1-201ENST00000422823 811 ntBASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H2AAQ96QV6 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 GABARAPL3-202ENST00000624044 1851 ntBASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 AC092667.1-201ENST00000434301 2586 ntBASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HIST1H2AAQ96QV6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 TERF1P5-201ENST00000477545 1207 ntBASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 RARRES2P6-201ENST00000567333 442 ntBASIC17.53■□□□□ 0.4
HIST1H2AAQ96QV6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms