Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.7■■□□□ 1.06
ZNF558Q96NG5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.7■■□□□ 1.06
ZNF558Q96NG5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.7■■□□□ 1.06
ZNF558Q96NG5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.7■■□□□ 1.06
ZNF558Q96NG5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
ZNF558Q96NG5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 AC023632.3-201ENST00000521633 145 ntBASIC21.69■■□□□ 1.06
ZNF558Q96NG5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.69■■□□□ 1.06
ZNF558Q96NG5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 MIR1224-201ENST00000408193 85 ntBASIC21.68■■□□□ 1.06
ZNF558Q96NG5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 AL121829.2-201ENST00000620908 328 ntBASIC21.68■■□□□ 1.06
ZNF558Q96NG5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF558Q96NG5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.67■■□□□ 1.06
ZNF558Q96NG5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 TSPY15P-201ENST00000457163 923 ntBASIC21.66■■□□□ 1.06
ZNF558Q96NG5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 AC027702.1-201ENST00000563810 1770 ntBASIC21.66■■□□□ 1.06
ZNF558Q96NG5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.66■■□□□ 1.06
ZNF558Q96NG5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 AC087499.1-201ENST00000418141 1075 ntBASIC21.65■■□□□ 1.06
ZNF558Q96NG5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.65■■□□□ 1.06
ZNF558Q96NG5 AC133561.5-201ENST00000635547 218 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms