Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
HPS1Q92902 DUX4L6-201ENST00000626483 1275 ntBASIC18.43■□□□□ 0.54
HPS1Q92902 DUX4L1-201ENST00000627662 1275 ntBASIC18.43■□□□□ 0.54
HPS1Q92902 DUX4L8-201ENST00000629013 1275 ntBASIC18.43■□□□□ 0.54
HPS1Q92902 DUX4L3-201ENST00000630187 1275 ntBASIC18.43■□□□□ 0.54
HPS1Q92902 DUX4L7-201ENST00000630678 1275 ntBASIC18.43■□□□□ 0.54
HPS1Q92902 DUX4L5-201ENST00000630834 1275 ntBASIC18.43■□□□□ 0.54
HPS1Q92902 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.43■□□□□ 0.54
HPS1Q92902 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HPS1Q92902 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HPS1Q92902 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.43■□□□□ 0.54
HPS1Q92902 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.43■□□□□ 0.54
HPS1Q92902 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HPS1Q92902 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HPS1Q92902 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.42■□□□□ 0.54
HPS1Q92902 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.42■□□□□ 0.54
HPS1Q92902 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.42■□□□□ 0.54
HPS1Q92902 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.42■□□□□ 0.54
HPS1Q92902 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HPS1Q92902 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.42■□□□□ 0.54
HPS1Q92902 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.42■□□□□ 0.54
HPS1Q92902 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.42■□□□□ 0.54
HPS1Q92902 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.42■□□□□ 0.54
HPS1Q92902 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HPS1Q92902 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.42■□□□□ 0.54
HPS1Q92902 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
HPS1Q92902 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HPS1Q92902 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS1Q92902 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HPS1Q92902 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 AC005332.8-201ENST00000622750 2735 ntBASIC18.41■□□□□ 0.54
HPS1Q92902 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
HPS1Q92902 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 MIR6084-201ENST00000622012 110 ntBASIC18.41■□□□□ 0.54
HPS1Q92902 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
HPS1Q92902 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HPS1Q92902 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.41■□□□□ 0.54
HPS1Q92902 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HPS1Q92902 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS1Q92902 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HPS1Q92902 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.4■□□□□ 0.54
HPS1Q92902 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.4■□□□□ 0.54
HPS1Q92902 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS1Q92902 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HPS1Q92902 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS1Q92902 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.4■□□□□ 0.54
HPS1Q92902 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HPS1Q92902 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.4■□□□□ 0.54
HPS1Q92902 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS1Q92902 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.4■□□□□ 0.54
HPS1Q92902 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HPS1Q92902 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HPS1Q92902 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.4■□□□□ 0.54
HPS1Q92902 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
HPS1Q92902 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HPS1Q92902 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HPS1Q92902 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.39■□□□□ 0.54
HPS1Q92902 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HPS1Q92902 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS1Q92902 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.39■□□□□ 0.53
HPS1Q92902 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HPS1Q92902 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HPS1Q92902 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS1Q92902 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPS1Q92902 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS1Q92902 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPS1Q92902 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HPS1Q92902 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms