Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB1Q8WWH5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB1Q8WWH5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 GUSBP5-201ENST00000418136 578 ntBASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB1Q8WWH5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 AC053503.5-201ENST00000601508 636 ntBASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.54■□□□□ 0.56
TRUB1Q8WWH5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.53■□□□□ 0.56
TRUB1Q8WWH5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms