Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.14■□□□□ 0.97
TRAF3IP1Q8TDR0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.14■□□□□ 0.97
TRAF3IP1Q8TDR0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRAF3IP1Q8TDR0 TERF1P5-201ENST00000477545 1207 ntBASIC21.14■□□□□ 0.97
TRAF3IP1Q8TDR0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.14■□□□□ 0.97
TRAF3IP1Q8TDR0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAF3IP1Q8TDR0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.14■□□□□ 0.97
TRAF3IP1Q8TDR0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 AC026271.2-201ENST00000428091 497 ntBASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP1Q8TDR0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP1Q8TDR0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 SLC25A24-204ENST00000569674 2357 ntBASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP1Q8TDR0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 AL591742.1-201ENST00000604433 565 ntBASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 MIR5787-201ENST00000611784 55 ntBASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 AC013268.1-206ENST00000638368 961 ntBASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 AC112229.1-201ENST00000639295 961 ntBASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 AL512408.1-201ENST00000569378 2000 ntBASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.1■□□□□ 0.97
TRAF3IP1Q8TDR0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.09■□□□□ 0.97
TRAF3IP1Q8TDR0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAF3IP1Q8TDR0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAF3IP1Q8TDR0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms