Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC105020.6-201ENST00000621523 1217 ntBASIC19.44■□□□□ 0.7
ZNF248Q8NDW4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF248Q8NDW4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF248Q8NDW4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF248Q8NDW4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF248Q8NDW4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 CYP21A1P-202ENST00000354927 1481 ntBASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 AC012306.2-201ENST00000609350 630 ntBASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF248Q8NDW4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 AC113410.3-201ENST00000623366 203 ntBASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF248Q8NDW4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 AL445228.2-201ENST00000605589 952 ntBASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF248Q8NDW4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 PRKY-204ENST00000533551 1019 ntBASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 RARRES2P10-201ENST00000564312 460 ntBASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 CD177P1-201ENST00000606252 935 ntBASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF248Q8NDW4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms