Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.85■□□□□ 0.93
RTL3Q8N8U3 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.85■□□□□ 0.93
RTL3Q8N8U3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 AC092720.2-201ENST00000602388 1665 ntBASIC20.85■□□□□ 0.93
RTL3Q8N8U3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 AC073314.1-201ENST00000568729 2216 ntBASIC20.85■□□□□ 0.93
RTL3Q8N8U3 AP005212.1-201ENST00000581547 1997 ntBASIC20.85■□□□□ 0.93
RTL3Q8N8U3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RTL3Q8N8U3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 AL355802.2-201ENST00000402069 882 ntBASIC20.84■□□□□ 0.93
RTL3Q8N8U3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.84■□□□□ 0.93
RTL3Q8N8U3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL3Q8N8U3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RTL3Q8N8U3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL3Q8N8U3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL3Q8N8U3 DUSP5P2-201ENST00000426873 1033 ntBASIC20.83■□□□□ 0.93
RTL3Q8N8U3 AC073210.2-201ENST00000430369 194 ntBASIC20.83■□□□□ 0.93
RTL3Q8N8U3 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.83■□□□□ 0.93
RTL3Q8N8U3 AC098934.4-201ENST00000564127 592 ntBASIC20.83■□□□□ 0.93
RTL3Q8N8U3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
RTL3Q8N8U3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTL3Q8N8U3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTL3Q8N8U3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.82■□□□□ 0.92
RTL3Q8N8U3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 AC091874.3-201ENST00000512672 1195 ntBASIC20.82■□□□□ 0.92
RTL3Q8N8U3 C2orf69P4-201ENST00000565394 541 ntBASIC20.82■□□□□ 0.92
RTL3Q8N8U3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 AC020907.5-201ENST00000624372 1936 ntBASIC20.82■□□□□ 0.92
RTL3Q8N8U3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL3Q8N8U3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 AC069152.1-201ENST00000438030 544 ntBASIC20.81■□□□□ 0.92
RTL3Q8N8U3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTL3Q8N8U3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms