Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPOQ8N3V7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 KRASP1-201ENST00000407852 552 ntBASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPOQ8N3V7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 AL356652.1-201ENST00000615962 565 ntBASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 AC006557.6-201ENST00000623071 864 ntBASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SYNPOQ8N3V7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
SYNPOQ8N3V7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
SYNPOQ8N3V7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 AC007375.3-201ENST00000600936 2314 ntBASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 PRKY-204ENST00000533551 1019 ntBASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 AC113410.3-201ENST00000623366 203 ntBASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SYNPOQ8N3V7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 AC097493.4-201ENST00000641197 219 ntBASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.69■□□□□ 0.9
SYNPOQ8N3V7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.68■□□□□ 0.9
SYNPOQ8N3V7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms