Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CCDC83Q8IWF9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC83Q8IWF9 TCF3P1-201ENST00000423021 1937 ntBASIC23.86■■□□□ 1.41
CCDC83Q8IWF9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.86■■□□□ 1.41
CCDC83Q8IWF9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 AC097381.1-201ENST00000429019 1296 ntBASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 AC034268.1-201ENST00000441047 882 ntBASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CCDC83Q8IWF9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
CCDC83Q8IWF9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC83Q8IWF9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 CDV3P1-201ENST00000471403 739 ntBASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 MIR6821-201ENST00000617625 74 ntBASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 DPP3P2-201ENST00000416030 1696 ntBASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC83Q8IWF9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 AC010536.3-201ENST00000620306 533 ntBASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC83Q8IWF9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 TERF1P5-201ENST00000477545 1207 ntBASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCDC83Q8IWF9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms