Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RAB11FIP4Q86YS3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAB11FIP4Q86YS3 AP005212.1-201ENST00000581547 1997 ntBASIC23.85■■□□□ 1.41
RAB11FIP4Q86YS3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
RAB11FIP4Q86YS3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RAB11FIP4Q86YS3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 AC133552.2-202ENST00000575694 574 ntBASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 AL121832.2-201ENST00000610979 668 ntBASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 MKRN4P-201ENST00000444706 1521 ntBASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.84■■□□□ 1.41
RAB11FIP4Q86YS3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 NCF1B-203ENST00000435988 1254 ntBASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 CYP2T3P-201ENST00000601990 817 ntBASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RAB11FIP4Q86YS3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RAB11FIP4Q86YS3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RAB11FIP4Q86YS3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
RAB11FIP4Q86YS3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
RAB11FIP4Q86YS3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RAB11FIP4Q86YS3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.83■■□□□ 1.4
RAB11FIP4Q86YS3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RAB11FIP4Q86YS3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
RAB11FIP4Q86YS3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RAB11FIP4Q86YS3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 MCRIP2P1-201ENST00000394346 511 ntBASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 AC098934.4-201ENST00000564127 592 ntBASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 AC087633.2-202ENST00000565166 1439 ntBASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB11FIP4Q86YS3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 AL356652.1-201ENST00000615962 565 ntBASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 KRT8P36-201ENST00000489121 1440 ntBASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP4Q86YS3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 GPX1P1-201ENST00000388829 606 ntBASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 BX276092.2-201ENST00000417668 665 ntBASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms