Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC107956.1-201ENST00000494359 873 ntBASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 ECEL1P3-201ENST00000427961 737 ntBASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 AC005829.2-201ENST00000571422 1056 ntBASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 LINC01023-201ENST00000606054 436 ntBASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI1Q7Z5J4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 AC233702.5-201ENST00000584107 538 ntBASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 AL049637.2-201ENST00000641778 930 ntBASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAI1Q7Z5J4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 BX088651.1-201ENST00000540551 451 ntBASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAI1Q7Z5J4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
RAI1Q7Z5J4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RAI1Q7Z5J4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RAI1Q7Z5J4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 C2orf69P4-201ENST00000565394 541 ntBASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 CLDN5-201ENST00000403084 2357 ntBASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.39■□□□□ 0.37
RAI1Q7Z5J4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms