Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 AL157385.1-201ENST00000446973 268 ntBASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 AF106564.1-201ENST00000607058 2553 ntBASIC23.13■■□□□ 1.29
PPP4R3CPQ6ZMV5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 CCNT2P1-201ENST00000423082 1315 ntBASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 AL049796.1-201ENST00000565336 1766 ntBASIC23.12■■□□□ 1.29
PPP4R3CPQ6ZMV5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 CROCCP5-201ENST00000436658 830 ntBASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC010536.3-201ENST00000620306 533 ntBASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC231657.2-201ENST00000624556 255 ntBASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC106730.3-201ENST00000624568 641 ntBASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 OR6C71P-202ENST00000641886 1107 ntBASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.11■■□□□ 1.29
PPP4R3CPQ6ZMV5 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 OR51A6P-201ENST00000418680 1004 ntBASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC120498.10-201ENST00000621827 505 ntBASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.1■■□□□ 1.29
PPP4R3CPQ6ZMV5 KRT16P2-201ENST00000414673 1423 ntBASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R3CPQ6ZMV5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 WBP1LP6-201ENST00000438434 424 ntBASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 MIR4760-201ENST00000585040 80 ntBASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.08■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC005332.10-201ENST00000612725 619 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms