Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF220Q5VTB9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 AC055733.4-201ENST00000638462 1354 ntBASIC19.48■□□□□ 0.71
RNF220Q5VTB9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 AL136967.2-201ENST00000623968 743 ntBASIC19.48■□□□□ 0.71
RNF220Q5VTB9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF220Q5VTB9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 AC006128.1-201ENST00000624704 1661 ntBASIC19.47■□□□□ 0.71
RNF220Q5VTB9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 AL139246.5-201ENST00000606645 996 ntBASIC19.47■□□□□ 0.71
RNF220Q5VTB9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF220Q5VTB9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 AC005224.4-201ENST00000583262 1652 ntBASIC19.46■□□□□ 0.71
RNF220Q5VTB9 BX005040.4-201ENST00000637145 1518 ntBASIC19.46■□□□□ 0.71
RNF220Q5VTB9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 SUDS3P1-201ENST00000505831 966 ntBASIC19.46■□□□□ 0.71
RNF220Q5VTB9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF220Q5VTB9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms