Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 AC091305.1-201ENST00000479476 895 ntBASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 AL354811.1-201ENST00000610286 706 ntBASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCN1P1Q5VSP4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 MIR939-201ENST00000401314 82 ntBASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 AF213884.3-201ENST00000563833 479 ntBASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 AC120498.10-201ENST00000621827 505 ntBASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.31■□□□□ 0.52
LCN1P1Q5VSP4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 TPRG1LP1-201ENST00000598702 760 ntBASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 KRT87P-202ENST00000534226 1464 ntBASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCN1P1Q5VSP4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 AC099778.1-201ENST00000568593 1911 ntBASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 AC079140.4-201ENST00000507448 529 ntBASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCN1P1Q5VSP4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCN1P1Q5VSP4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms