Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHC1P78364 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.32■□□□□ 0.68
PHC1P78364 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.32■□□□□ 0.68
PHC1P78364 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHC1P78364 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.32■□□□□ 0.68
PHC1P78364 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHC1P78364 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHC1P78364 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.32■□□□□ 0.68
PHC1P78364 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.32■□□□□ 0.68
PHC1P78364 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHC1P78364 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.31■□□□□ 0.68
PHC1P78364 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PHC1P78364 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PHC1P78364 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHC1P78364 AC243732.1-201ENST00000612648 864 ntBASIC19.31■□□□□ 0.68
PHC1P78364 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.31■□□□□ 0.68
PHC1P78364 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHC1P78364 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.31■□□□□ 0.68
PHC1P78364 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHC1P78364 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHC1P78364 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PHC1P78364 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PHC1P78364 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.3■□□□□ 0.68
PHC1P78364 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PHC1P78364 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.3■□□□□ 0.68
PHC1P78364 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.3■□□□□ 0.68
PHC1P78364 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.3■□□□□ 0.68
PHC1P78364 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.3■□□□□ 0.68
PHC1P78364 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.3■□□□□ 0.68
PHC1P78364 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PHC1P78364 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.3■□□□□ 0.68
PHC1P78364 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PHC1P78364 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PHC1P78364 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.3■□□□□ 0.68
PHC1P78364 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.3■□□□□ 0.68
PHC1P78364 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PHC1P78364 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PHC1P78364 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
PHC1P78364 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PHC1P78364 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PHC1P78364 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.29■□□□□ 0.68
PHC1P78364 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.29■□□□□ 0.68
PHC1P78364 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.29■□□□□ 0.68
PHC1P78364 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PHC1P78364 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.29■□□□□ 0.68
PHC1P78364 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.29■□□□□ 0.68
PHC1P78364 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PHC1P78364 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.28■□□□□ 0.68
PHC1P78364 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.28■□□□□ 0.68
PHC1P78364 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.28■□□□□ 0.68
PHC1P78364 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.28■□□□□ 0.68
PHC1P78364 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.28■□□□□ 0.68
PHC1P78364 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 AC125437.2-201ENST00000625180 2167 ntBASIC19.28■□□□□ 0.68
PHC1P78364 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PHC1P78364 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHC1P78364 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.28■□□□□ 0.68
PHC1P78364 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.28■□□□□ 0.68
PHC1P78364 ZNRF2P3-201ENST00000424200 374 ntBASIC19.28■□□□□ 0.68
PHC1P78364 SLC7A5P1-201ENST00000568957 537 ntBASIC19.28■□□□□ 0.68
PHC1P78364 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.28■□□□□ 0.68
PHC1P78364 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PHC1P78364 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms