Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EIF3EP60228 FAM21FP-204ENST00000608637 956 ntBASIC20.96■□□□□ 0.95
EIF3EP60228 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EIF3EP60228 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
EIF3EP60228 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
EIF3EP60228 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
EIF3EP60228 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
EIF3EP60228 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.95■□□□□ 0.94
EIF3EP60228 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.95■□□□□ 0.94
EIF3EP60228 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.95■□□□□ 0.94
EIF3EP60228 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
EIF3EP60228 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
EIF3EP60228 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.95■□□□□ 0.94
EIF3EP60228 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.95■□□□□ 0.94
EIF3EP60228 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.95■□□□□ 0.94
EIF3EP60228 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.95■□□□□ 0.94
EIF3EP60228 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.95■□□□□ 0.94
EIF3EP60228 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.95■□□□□ 0.94
EIF3EP60228 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.95■□□□□ 0.94
EIF3EP60228 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3EP60228 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
EIF3EP60228 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3EP60228 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
EIF3EP60228 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EIF3EP60228 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3EP60228 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.94■□□□□ 0.94
EIF3EP60228 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.94■□□□□ 0.94
EIF3EP60228 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3EP60228 AC010536.3-201ENST00000620306 533 ntBASIC20.94■□□□□ 0.94
EIF3EP60228 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3EP60228 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3EP60228 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.94■□□□□ 0.94
EIF3EP60228 AFG3L1P-217ENST00000557444 2447 ntBASIC20.94■□□□□ 0.94
EIF3EP60228 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3EP60228 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
EIF3EP60228 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.93■□□□□ 0.94
EIF3EP60228 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.93■□□□□ 0.94
EIF3EP60228 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
EIF3EP60228 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.93■□□□□ 0.94
EIF3EP60228 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
EIF3EP60228 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
EIF3EP60228 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.93■□□□□ 0.94
EIF3EP60228 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
EIF3EP60228 TERF1P5-201ENST00000477545 1207 ntBASIC20.93■□□□□ 0.94
EIF3EP60228 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EIF3EP60228 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.93■□□□□ 0.94
EIF3EP60228 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3EP60228 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3EP60228 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3EP60228 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3EP60228 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
EIF3EP60228 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3EP60228 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.92■□□□□ 0.94
EIF3EP60228 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.92■□□□□ 0.94
EIF3EP60228 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.92■□□□□ 0.94
EIF3EP60228 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3EP60228 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
EIF3EP60228 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.92■□□□□ 0.94
EIF3EP60228 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.92■□□□□ 0.94
EIF3EP60228 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.92■□□□□ 0.94
EIF3EP60228 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3EP60228 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3EP60228 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3EP60228 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.92■□□□□ 0.94
EIF3EP60228 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3EP60228 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3EP60228 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3EP60228 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3EP60228 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3EP60228 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.91■□□□□ 0.94
EIF3EP60228 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.91■□□□□ 0.94
EIF3EP60228 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.91■□□□□ 0.94
EIF3EP60228 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms