Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN8P56748 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN8P56748 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN8P56748 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN8P56748 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN8P56748 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN8P56748 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN8P56748 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN8P56748 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLDN8P56748 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN8P56748 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN8P56748 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN8P56748 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN8P56748 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN8P56748 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.31■□□□□ 0.68
CLDN8P56748 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN8P56748 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN8P56748 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN8P56748 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN8P56748 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN8P56748 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN8P56748 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CLDN8P56748 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.3■□□□□ 0.68
CLDN8P56748 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 ZNRF2P3-201ENST00000424200 374 ntBASIC19.3■□□□□ 0.68
CLDN8P56748 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.3■□□□□ 0.68
CLDN8P56748 KRT18P61-201ENST00000585825 1298 ntBASIC19.3■□□□□ 0.68
CLDN8P56748 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CLDN8P56748 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLDN8P56748 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLDN8P56748 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN8P56748 DPP3P2-201ENST00000416030 1696 ntBASIC19.3■□□□□ 0.68
CLDN8P56748 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN8P56748 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN8P56748 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN8P56748 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN8P56748 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLDN8P56748 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN8P56748 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN8P56748 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN8P56748 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN8P56748 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN8P56748 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN8P56748 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLDN8P56748 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN8P56748 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN8P56748 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN8P56748 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN8P56748 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.29■□□□□ 0.68
CLDN8P56748 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CLDN8P56748 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLDN8P56748 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN8P56748 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN8P56748 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN8P56748 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN8P56748 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN8P56748 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN8P56748 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN8P56748 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN8P56748 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN8P56748 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLDN8P56748 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLDN8P56748 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN8P56748 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN8P56748 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLDN8P56748 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CLDN8P56748 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN8P56748 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 UBE2DNL-204ENST00000602536 740 ntBASIC19.28■□□□□ 0.68
CLDN8P56748 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 AC007952.6-201ENST00000573168 2673 ntBASIC19.28■□□□□ 0.68
CLDN8P56748 AC003957.1-201ENST00000625108 2673 ntBASIC19.28■□□□□ 0.68
CLDN8P56748 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN8P56748 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLDN8P56748 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CLDN8P56748 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN8P56748 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN8P56748 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms