Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH12P55289 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH12P55289 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH12P55289 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH12P55289 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDH12P55289 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH12P55289 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDH12P55289 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH12P55289 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH12P55289 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH12P55289 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDH12P55289 AC010141.2-201ENST00000452426 721 ntBASIC18.88■□□□□ 0.61
CDH12P55289 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.88■□□□□ 0.61
CDH12P55289 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH12P55289 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH12P55289 TCF3P1-201ENST00000423021 1937 ntBASIC18.88■□□□□ 0.61
CDH12P55289 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH12P55289 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH12P55289 RNF165-205ENST00000588679 2904 ntBASIC18.87■□□□□ 0.61
CDH12P55289 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH12P55289 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH12P55289 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDH12P55289 KRT16P2-201ENST00000414673 1423 ntBASIC18.87■□□□□ 0.61
CDH12P55289 YBX1P1-201ENST00000445822 960 ntBASIC18.87■□□□□ 0.61
CDH12P55289 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH12P55289 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH12P55289 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH12P55289 TERF1P2-201ENST00000583350 1212 ntBASIC18.87■□□□□ 0.61
CDH12P55289 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH12P55289 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH12P55289 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH12P55289 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH12P55289 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH12P55289 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH12P55289 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH12P55289 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CDH12P55289 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH12P55289 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH12P55289 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH12P55289 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH12P55289 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH12P55289 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH12P55289 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.86■□□□□ 0.61
CDH12P55289 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH12P55289 AC104187.1-201ENST00000607510 612 ntBASIC18.86■□□□□ 0.61
CDH12P55289 RARRES2P11-201ENST00000635158 484 ntBASIC18.86■□□□□ 0.61
CDH12P55289 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH12P55289 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH12P55289 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH12P55289 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDH12P55289 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH12P55289 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH12P55289 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDH12P55289 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH12P55289 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH12P55289 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH12P55289 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH12P55289 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDH12P55289 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH12P55289 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH12P55289 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDH12P55289 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.85■□□□□ 0.61
CDH12P55289 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH12P55289 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.85■□□□□ 0.61
CDH12P55289 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH12P55289 DUX4L2-201ENST00000561772 1275 ntBASIC18.85■□□□□ 0.61
CDH12P55289 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
CDH12P55289 AC120498.10-201ENST00000621827 505 ntBASIC18.85■□□□□ 0.61
CDH12P55289 DUX4L6-201ENST00000626483 1275 ntBASIC18.85■□□□□ 0.61
CDH12P55289 DUX4L1-201ENST00000627662 1275 ntBASIC18.85■□□□□ 0.61
CDH12P55289 DUX4L8-201ENST00000629013 1275 ntBASIC18.85■□□□□ 0.61
CDH12P55289 DUX4L3-201ENST00000630187 1275 ntBASIC18.85■□□□□ 0.61
CDH12P55289 DUX4L7-201ENST00000630678 1275 ntBASIC18.85■□□□□ 0.61
CDH12P55289 DUX4L5-201ENST00000630834 1275 ntBASIC18.85■□□□□ 0.61
CDH12P55289 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH12P55289 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.85■□□□□ 0.61
CDH12P55289 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDH12P55289 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH12P55289 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH12P55289 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDH12P55289 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CDH12P55289 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH12P55289 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH12P55289 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH12P55289 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH12P55289 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDH12P55289 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH12P55289 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH12P55289 ZNRF2P3-201ENST00000424200 374 ntBASIC18.84■□□□□ 0.61
CDH12P55289 CCDC92B-201ENST00000575506 885 ntBASIC18.84■□□□□ 0.61
CDH12P55289 AP001160.3-201ENST00000601484 763 ntBASIC18.84■□□□□ 0.61
CDH12P55289 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH12P55289 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH12P55289 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH12P55289 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH12P55289 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDH12P55289 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH12P55289 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH12P55289 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH12P55289 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms