Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.37■□□□□ 0.85
NUBP1P53384 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.37■□□□□ 0.85
NUBP1P53384 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 HNRNPA1P23-201ENST00000491091 1133 ntBASIC20.37■□□□□ 0.85
NUBP1P53384 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUBP1P53384 C11orf96-202ENST00000528572 1834 ntBASIC20.37■□□□□ 0.85
NUBP1P53384 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUBP1P53384 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUBP1P53384 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUBP1P53384 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUBP1P53384 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NUBP1P53384 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUBP1P53384 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NUBP1P53384 RNF152P1-201ENST00000397754 604 ntBASIC20.36■□□□□ 0.85
NUBP1P53384 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.36■□□□□ 0.85
NUBP1P53384 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUBP1P53384 AL356652.1-201ENST00000615962 565 ntBASIC20.36■□□□□ 0.85
NUBP1P53384 CR392000.1-201ENST00000624770 1228 ntBASIC20.36■□□□□ 0.85
NUBP1P53384 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.36■□□□□ 0.85
NUBP1P53384 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUBP1P53384 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUBP1P53384 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.36■□□□□ 0.85
NUBP1P53384 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUBP1P53384 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.36■□□□□ 0.85
NUBP1P53384 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUBP1P53384 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NUBP1P53384 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.35■□□□□ 0.85
NUBP1P53384 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUBP1P53384 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUBP1P53384 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUBP1P53384 HCG24-202ENST00000414398 717 ntTSL 3 BASIC20.35■□□□□ 0.85
NUBP1P53384 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.35■□□□□ 0.85
NUBP1P53384 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.35■□□□□ 0.85
NUBP1P53384 AC091390.4-202ENST00000476426 537 ntBASIC20.35■□□□□ 0.85
NUBP1P53384 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
NUBP1P53384 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.35■□□□□ 0.85
NUBP1P53384 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
NUBP1P53384 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUBP1P53384 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUBP1P53384 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.35■□□□□ 0.85
NUBP1P53384 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.35■□□□□ 0.85
NUBP1P53384 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.35■□□□□ 0.85
NUBP1P53384 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUBP1P53384 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUBP1P53384 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.35■□□□□ 0.85
NUBP1P53384 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUBP1P53384 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NUBP1P53384 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.34■□□□□ 0.85
NUBP1P53384 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.34■□□□□ 0.85
NUBP1P53384 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUBP1P53384 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.34■□□□□ 0.85
NUBP1P53384 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.34■□□□□ 0.85
NUBP1P53384 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.34■□□□□ 0.85
NUBP1P53384 AC023632.3-201ENST00000521633 145 ntBASIC20.34■□□□□ 0.85
NUBP1P53384 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.34■□□□□ 0.85
NUBP1P53384 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.34■□□□□ 0.85
NUBP1P53384 AC026790.2-201ENST00000606282 430 ntBASIC20.34■□□□□ 0.85
NUBP1P53384 DGCR10-201ENST00000609839 495 ntBASIC20.34■□□□□ 0.85
NUBP1P53384 AL121956.5-201ENST00000625261 221 ntBASIC20.34■□□□□ 0.85
NUBP1P53384 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUBP1P53384 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NUBP1P53384 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUBP1P53384 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUBP1P53384 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.33■□□□□ 0.85
NUBP1P53384 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NUBP1P53384 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NUBP1P53384 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NUBP1P53384 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NUBP1P53384 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NUBP1P53384 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUBP1P53384 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.33■□□□□ 0.85
NUBP1P53384 FSCN1P1-201ENST00000568912 1481 ntBASIC20.33■□□□□ 0.85
NUBP1P53384 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NUBP1P53384 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUBP1P53384 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.33■□□□□ 0.85
NUBP1P53384 FAM207BP-201ENST00000447172 505 ntBASIC20.33■□□□□ 0.85
NUBP1P53384 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.33■□□□□ 0.85
NUBP1P53384 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.33■□□□□ 0.85
NUBP1P53384 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC20.33■□□□□ 0.85
NUBP1P53384 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.33■□□□□ 0.85
NUBP1P53384 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.33■□□□□ 0.85
NUBP1P53384 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.33■□□□□ 0.85
NUBP1P53384 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.33■□□□□ 0.85
NUBP1P53384 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NUBP1P53384 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.33■□□□□ 0.84
NUBP1P53384 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
NUBP1P53384 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.33■□□□□ 0.84
NUBP1P53384 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NUBP1P53384 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUBP1P53384 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NUBP1P53384 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.32■□□□□ 0.84
NUBP1P53384 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUBP1P53384 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.32■□□□□ 0.84
NUBP1P53384 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUBP1P53384 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms