Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.74■□□□□ 0.75
PDX1P52945 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.74■□□□□ 0.75
PDX1P52945 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.74■□□□□ 0.75
PDX1P52945 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDX1P52945 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDX1P52945 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDX1P52945 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDX1P52945 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
PDX1P52945 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PDX1P52945 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.73■□□□□ 0.75
PDX1P52945 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDX1P52945 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.73■□□□□ 0.75
PDX1P52945 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.73■□□□□ 0.75
PDX1P52945 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.73■□□□□ 0.75
PDX1P52945 MIR4497-201ENST00000583208 89 ntBASIC19.73■□□□□ 0.75
PDX1P52945 Z99916.2-201ENST00000604037 246 ntBASIC19.73■□□□□ 0.75
PDX1P52945 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDX1P52945 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDX1P52945 AC005229.4-201ENST00000610085 2198 ntBASIC19.73■□□□□ 0.75
PDX1P52945 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PDX1P52945 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDX1P52945 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDX1P52945 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PDX1P52945 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDX1P52945 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDX1P52945 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDX1P52945 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDX1P52945 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.72■□□□□ 0.75
PDX1P52945 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PDX1P52945 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.72■□□□□ 0.75
PDX1P52945 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.72■□□□□ 0.75
PDX1P52945 AC116050.2-201ENST00000612102 1779 ntBASIC19.72■□□□□ 0.75
PDX1P52945 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.72■□□□□ 0.75
PDX1P52945 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDX1P52945 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDX1P52945 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDX1P52945 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PDX1P52945 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.71■□□□□ 0.75
PDX1P52945 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDX1P52945 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.71■□□□□ 0.75
PDX1P52945 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.71■□□□□ 0.75
PDX1P52945 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.71■□□□□ 0.75
PDX1P52945 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.71■□□□□ 0.75
PDX1P52945 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.71■□□□□ 0.75
PDX1P52945 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDX1P52945 POM121L13P-201ENST00000422362 380 ntBASIC19.71■□□□□ 0.75
PDX1P52945 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDX1P52945 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.71■□□□□ 0.75
PDX1P52945 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.71■□□□□ 0.75
PDX1P52945 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDX1P52945 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDX1P52945 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.71■□□□□ 0.75
PDX1P52945 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.71■□□□□ 0.75
PDX1P52945 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDX1P52945 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.71■□□□□ 0.75
PDX1P52945 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.71■□□□□ 0.75
PDX1P52945 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.7■□□□□ 0.74
PDX1P52945 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.7■□□□□ 0.74
PDX1P52945 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
PDX1P52945 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
PDX1P52945 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.7■□□□□ 0.74
PDX1P52945 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.7■□□□□ 0.74
PDX1P52945 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDX1P52945 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PDX1P52945 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.69■□□□□ 0.74
PDX1P52945 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.69■□□□□ 0.74
PDX1P52945 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
PDX1P52945 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 AF106564.1-201ENST00000607058 2553 ntBASIC19.69■□□□□ 0.74
PDX1P52945 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.69■□□□□ 0.74
PDX1P52945 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PDX1P52945 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 SNORA78-201ENST00000459373 127 ntBASIC19.69■□□□□ 0.74
PDX1P52945 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.69■□□□□ 0.74
PDX1P52945 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDX1P52945 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.69■□□□□ 0.74
PDX1P52945 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PDX1P52945 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDX1P52945 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PDX1P52945 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms