Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.338e-14■■■□□ 16.5
NCBP2P52298 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.555e-57■■■□□ 16.5
NCBP2P52298 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.71□□□□□ -0.215e-57■■■□□ 16.5
NCBP2P52298 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.07□□□□□ -0.321e-21■■■□□ 16.5
NCBP2P52298 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.131e-21■■■□□ 16.5
NCBP2P52298 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.483e-9■■■□□ 16.5
NCBP2P52298 SLC39A10-208ENST00000464301 571 ntTSL 414.41□□□□□ -0.12e-6■■■□□ 16.5
NCBP2P52298 ASPSCR1-215ENST00000583142 532 ntTSL 39.94□□□□□ -0.821e-10■■■□□ 16.5
NCBP2P52298 SLC39A10-207ENST00000458054 593 ntTSL 48.07□□□□□ -1.122e-6■■■□□ 16.5
NCBP2P52298 SLC39A10-203ENST00000412905 337 ntTSL 37.88□□□□□ -1.152e-6■■■□□ 16.5
NCBP2P52298 SLC39A10-205ENST00000430412 4478 ntTSL 25.56□□□□□ -1.522e-6■■■□□ 16.5
NCBP2P52298 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.872e-6■■■□□ 16.5
NCBP2P52298 SLC39A10-206ENST00000444421 544 ntTSL 42.84□□□□□ -1.952e-6■■■□□ 16.5
NCBP2P52298 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.082e-6■■■□□ 16.5
NCBP2P52298 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.432e-8■■■□□ 16.5
NCBP2P52298 HOOK2-223ENST00000592808 1114 ntTSL 222.93■■□□□ 1.262e-8■■■□□ 16.5
NCBP2P52298 HOOK2-204ENST00000586284 851 ntTSL 322.24■■□□□ 1.152e-8■■■□□ 16.5
NCBP2P52298 D2HGDH-212ENST00000468064 2298 ntTSL 1 (best)21.16■□□□□ 0.982e-8■■■□□ 16.5
NCBP2P52298 HOOK2-210ENST00000589134 890 ntTSL 220.88■□□□□ 0.932e-8■■■□□ 16.5
NCBP2P52298 CENPU-205ENST00000510146 1549 ntTSL 1 (best)19.72■□□□□ 0.752e-8■■■□□ 16.5
NCBP2P52298 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.742e-8■■■□□ 16.5
NCBP2P52298 GTPBP2-206ENST00000452781 681 ntTSL 518■□□□□ 0.473e-8■■■□□ 16.5
NCBP2P52298 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.353e-8■■■□□ 16.5
NCBP2P52298 HOOK2-212ENST00000589400 1097 ntTSL 516.96■□□□□ 0.312e-8■■■□□ 16.5
NCBP2P52298 HOOK2-224ENST00000593143 585 ntTSL 316.77■□□□□ 0.282e-8■■■□□ 16.5
NCBP2P52298 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.28■□□□□ 0.22e-8■■■□□ 16.5
NCBP2P52298 HOOK2-220ENST00000592079 965 ntTSL 516.12■□□□□ 0.172e-8■■■□□ 16.5
NCBP2P52298 WDR6-212ENST00000472878 556 ntTSL 515.12■□□□□ 0.013e-6■■■□□ 16.5
NCBP2P52298 HOOK2-216ENST00000590839 801 ntTSL 314.55□□□□□ -0.082e-8■■■□□ 16.5
NCBP2P52298 HOOK2-222ENST00000592512 403 ntTSL 214.54□□□□□ -0.082e-8■■■□□ 16.5
NCBP2P52298 WDR6-209ENST00000461687 555 ntTSL 414.27□□□□□ -0.133e-6■■■□□ 16.5
NCBP2P52298 HOOK2-206ENST00000586719 729 ntTSL 512.68□□□□□ -0.382e-8■■■□□ 16.5
NCBP2P52298 HOOK2-218ENST00000591641 594 ntTSL 212.39□□□□□ -0.432e-8■■■□□ 16.5
NCBP2P52298 HOOK2-215ENST00000589965 873 ntTSL 511.75□□□□□ -0.532e-8■■■□□ 16.5
NCBP2P52298 HOOK2-207ENST00000587178 748 ntTSL 311.31□□□□□ -0.62e-8■■■□□ 16.5
NCBP2P52298 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC10.74□□□□□ -0.693e-6■■■□□ 16.5
NCBP2P52298 HOOK2-217ENST00000591251 973 ntTSL 310.56□□□□□ -0.722e-8■■■□□ 16.5
NCBP2P52298 SOGA1-202ENST00000279034 3703 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.742e-8■■■□□ 16.5
NCBP2P52298 WDR6-203ENST00000419837 538 ntTSL 410.19□□□□□ -0.783e-6■■■□□ 16.5
NCBP2P52298 HOOK2-213ENST00000589765 108 ntTSL 58.26□□□□□ -1.092e-8■■■□□ 16.5
NCBP2P52298 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.272e-18■■■□□ 16.5
NCBP2P52298 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.852e-18■■■□□ 16.5
NCBP2P52298 RNA5SP259-201ENST00000365541 109 ntBASIC0.97□□□□□ -2.252e-18■■■□□ 16.5
NCBP2P52298 MT-TH-201ENST00000387441 69 ntBASIC1.82□□□□□ -2.121e-323■■■□□ 16.5
NCBP2P52298 LINC01021-202ENST00000505775 946 ntTSL 1 (best) BASIC10.68□□□□□ -0.75e-11■■■□□ 16.5
NCBP2P52298 LINC01021-203ENST00000510165 1106 ntTSL 1 (best) BASIC10.13□□□□□ -0.795e-11■■■□□ 16.5
NCBP2P52298 LINC01021-201ENST00000503107 458 ntTSL 1 (best)3.29□□□□□ -1.885e-11■■■□□ 16.5
NCBP2P52298 LINC01021-206ENST00000514844 667 ntTSL 1 (best)3.03□□□□□ -1.925e-11■■■□□ 16.5
NCBP2P52298 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.99□□□□□ -1.935e-11■■■□□ 16.5
NCBP2P52298 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC10.88□□□□□ -0.676e-6■■■□□ 16.5
NCBP2P52298 UBE2B-204ENST00000504431 235 ntTSL 26.8□□□□□ -1.329e-18■■■□□ 16.4
NCBP2P52298 POR-206ENST00000421059 631 ntTSL 419.23■□□□□ 0.671e-9■■■□□ 16.4
NCBP2P52298 MIR4651-201ENST00000582622 73 ntBASIC18.17■□□□□ 0.51e-9■■■□□ 16.4
NCBP2P52298 POR-219ENST00000471238 600 ntTSL 316.09■□□□□ 0.171e-9■■■□□ 16.4
NCBP2P52298 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.051e-9■■■□□ 16.4
NCBP2P52298 POR-213ENST00000448410 1104 ntTSL 314.92□□□□□ -0.021e-9■■■□□ 16.4
NCBP2P52298 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.62□□□□□ -0.071e-9■■■□□ 16.4
NCBP2P52298 POR-203ENST00000412521 586 ntTSL 414.43□□□□□ -0.11e-9■■■□□ 16.4
NCBP2P52298 POR-215ENST00000453773 498 ntTSL 412.82□□□□□ -0.361e-9■■■□□ 16.4
NCBP2P52298 POR-211ENST00000439963 625 ntTSL 412.49□□□□□ -0.411e-9■■■□□ 16.4
NCBP2P52298 POR-204ENST00000414186 548 ntTSL 49.66□□□□□ -0.861e-9■■■□□ 16.4
NCBP2P52298 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.61□□□□□ -0.232e-8■■■□□ 16.4
NCBP2P52298 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.59□□□□□ -0.392e-8■■■□□ 16.4
NCBP2P52298 MIR2110-201ENST00000459421 75 ntBASIC10.43□□□□□ -0.742e-8■■■□□ 16.4
NCBP2P52298 AL163953.1-201ENST00000436530 726 ntTSL 3 BASIC10.19□□□□□ -0.782e-8■■■□□ 16.4
NCBP2P52298 ADH4-201ENST00000265512 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.922e-8■■■□□ 16.4
NCBP2P52298 ADH4-204ENST00000504125 665 ntTSL 57.63□□□□□ -1.192e-8■■■□□ 16.4
NCBP2P52298 ADH4-211ENST00000512499 946 ntTSL 57.63□□□□□ -1.192e-8■■■□□ 16.4
NCBP2P52298 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC6.76□□□□□ -1.332e-8■■■□□ 16.4
NCBP2P52298 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.66□□□□□ -1.342e-8■■■□□ 16.4
NCBP2P52298 ADH4-208ENST00000506705 1340 ntTSL 56.51□□□□□ -1.372e-8■■■□□ 16.4
NCBP2P52298 ADH4-206ENST00000504894 489 ntTSL 56.43□□□□□ -1.382e-8■■■□□ 16.4
NCBP2P52298 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.42e-8■■■□□ 16.4
NCBP2P52298 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.32□□□□□ -1.562e-8■■■□□ 16.4
NCBP2P52298 ADH4-205ENST00000504581 315 ntTSL 32.12□□□□□ -2.072e-8■■■□□ 16.4
NCBP2P52298 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.47□□□□□ -0.094e-8■■■□□ 16.4
NCBP2P52298 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.144e-8■■■□□ 16.4
NCBP2P52298 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC8.94□□□□□ -0.983e-11■■■□□ 16.4
NCBP2P52298 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.013e-11■■■□□ 16.4
NCBP2P52298 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.51e-6■■■□□ 16.4
NCBP2P52298 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.261e-6■■■□□ 16.4
NCBP2P52298 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.47■□□□□ 0.231e-6■■■□□ 16.4
NCBP2P52298 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.81■□□□□ 0.282e-10■■■□□ 16.3
NCBP2P52298 INS-IGF2-201ENST00000356578 1706 ntTSL 516.41■□□□□ 0.222e-10■■■□□ 16.3
NCBP2P52298 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.282e-10■■■□□ 16.3
NCBP2P52298 NAA35-203ENST00000416045 690 ntTSL 318.69■□□□□ 0.586e-7■■■□□ 16.3
NCBP2P52298 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.326e-7■■■□□ 16.3
NCBP2P52298 PMS1-216ENST00000447734 570 ntTSL 52.88□□□□□ -1.956e-8■■■□□ 16.3
NCBP2P52298 ATR-203ENST00000507148 724 ntTSL 313.03□□□□□ -0.329e-7■■■□□ 16.3
NCBP2P52298 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.259e-7■■■□□ 16.3
NCBP2P52298 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.831e-7■■■□□ 16.3
NCBP2P52298 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.58■■□□□ 1.531e-7■■■□□ 16.3
NCBP2P52298 RPS2-206ENST00000527302 719 ntTSL 323.78■■□□□ 1.41e-7■■■□□ 16.3
NCBP2P52298 RPS2-207ENST00000527826 837 ntTSL 1 (best)23.09■■□□□ 1.291e-7■■■□□ 16.3
NCBP2P52298 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.09■■□□□ 1.291e-7■■■□□ 16.3
NCBP2P52298 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.241e-7■■■□□ 16.3
NCBP2P52298 RPS2-213ENST00000533161 1186 ntTSL 1 (best)21.3■■□□□ 11e-7■■■□□ 16.3
NCBP2P52298 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.77■□□□□ 0.61e-7■■■□□ 16.3
NCBP2P52298 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.391e-7■■■□□ 16.3
NCBP2P52298 COPS6-210ENST00000496358 610 ntTSL 216.92■□□□□ 0.31e-7■■■□□ 16.3
Retrieved 100 of 18,329 protein–RNA pairs in 348.2 ms