Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.82■□□□□ 0.44
HCFC1P51610 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.82■□□□□ 0.44
HCFC1P51610 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HCFC1P51610 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.81■□□□□ 0.44
HCFC1P51610 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC1P51610 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC1P51610 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.81■□□□□ 0.44
HCFC1P51610 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
HCFC1P51610 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC1P51610 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HCFC1P51610 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HCFC1P51610 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HCFC1P51610 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HCFC1P51610 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.81■□□□□ 0.44
HCFC1P51610 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC1P51610 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.81■□□□□ 0.44
HCFC1P51610 C2orf69P4-201ENST00000565394 541 ntBASIC17.81■□□□□ 0.44
HCFC1P51610 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HCFC1P51610 AP001412.1-201ENST00000608405 714 ntBASIC17.81■□□□□ 0.44
HCFC1P51610 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HCFC1P51610 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1P51610 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HCFC1P51610 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1P51610 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.8■□□□□ 0.44
HCFC1P51610 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
HCFC1P51610 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.8■□□□□ 0.44
HCFC1P51610 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.8■□□□□ 0.44
HCFC1P51610 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1P51610 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HCFC1P51610 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
HCFC1P51610 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1P51610 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HCFC1P51610 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1P51610 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC1P51610 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC1P51610 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC1P51610 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1P51610 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1P51610 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC1P51610 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1P51610 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HCFC1P51610 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.8■□□□□ 0.44
HCFC1P51610 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HCFC1P51610 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.79■□□□□ 0.44
HCFC1P51610 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.79■□□□□ 0.44
HCFC1P51610 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1P51610 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.79■□□□□ 0.44
HCFC1P51610 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1P51610 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1P51610 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1P51610 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HCFC1P51610 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1P51610 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.79■□□□□ 0.44
HCFC1P51610 TSPY15P-201ENST00000457163 923 ntBASIC17.79■□□□□ 0.44
HCFC1P51610 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1P51610 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.79■□□□□ 0.44
HCFC1P51610 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HCFC1P51610 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.79■□□□□ 0.44
HCFC1P51610 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.79■□□□□ 0.44
HCFC1P51610 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HCFC1P51610 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HCFC1P51610 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
HCFC1P51610 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.78■□□□□ 0.44
HCFC1P51610 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1P51610 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1P51610 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.78■□□□□ 0.44
HCFC1P51610 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1P51610 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1P51610 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1P51610 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.78■□□□□ 0.44
HCFC1P51610 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.78■□□□□ 0.44
HCFC1P51610 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.78■□□□□ 0.44
HCFC1P51610 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HCFC1P51610 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1P51610 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HCFC1P51610 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.78■□□□□ 0.44
HCFC1P51610 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1P51610 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1P51610 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1P51610 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC1P51610 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1P51610 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC1P51610 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1P51610 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1P51610 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1P51610 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms