Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLK3P49761 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK3P49761 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.19■□□□□ 0.66
CLK3P49761 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.19■□□□□ 0.66
CLK3P49761 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK3P49761 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK3P49761 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CLK3P49761 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK3P49761 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK3P49761 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLK3P49761 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK3P49761 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK3P49761 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK3P49761 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK3P49761 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.19■□□□□ 0.66
CLK3P49761 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK3P49761 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK3P49761 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK3P49761 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK3P49761 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK3P49761 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK3P49761 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK3P49761 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK3P49761 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.18■□□□□ 0.66
CLK3P49761 SLC7A5P1-201ENST00000568957 537 ntBASIC19.18■□□□□ 0.66
CLK3P49761 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK3P49761 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK3P49761 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK3P49761 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK3P49761 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK3P49761 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK3P49761 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK3P49761 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.18■□□□□ 0.66
CLK3P49761 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK3P49761 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.17■□□□□ 0.66
CLK3P49761 AC020907.5-201ENST00000624372 1936 ntBASIC19.17■□□□□ 0.66
CLK3P49761 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK3P49761 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK3P49761 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CLK3P49761 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK3P49761 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK3P49761 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK3P49761 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.17■□□□□ 0.66
CLK3P49761 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.17■□□□□ 0.66
CLK3P49761 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK3P49761 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.17■□□□□ 0.66
CLK3P49761 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.17■□□□□ 0.66
CLK3P49761 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.17■□□□□ 0.66
CLK3P49761 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.17■□□□□ 0.66
CLK3P49761 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLK3P49761 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK3P49761 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLK3P49761 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLK3P49761 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.17■□□□□ 0.66
CLK3P49761 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLK3P49761 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.17■□□□□ 0.66
CLK3P49761 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK3P49761 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.16■□□□□ 0.66
CLK3P49761 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK3P49761 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK3P49761 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK3P49761 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK3P49761 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLK3P49761 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK3P49761 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK3P49761 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CLK3P49761 AC245052.3-201ENST00000450182 901 ntBASIC19.16■□□□□ 0.66
CLK3P49761 SLC7A5P2-201ENST00000553010 536 ntBASIC19.16■□□□□ 0.66
CLK3P49761 KRT18P61-201ENST00000585825 1298 ntBASIC19.16■□□□□ 0.66
CLK3P49761 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLK3P49761 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLK3P49761 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CLK3P49761 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK3P49761 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK3P49761 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK3P49761 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK3P49761 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK3P49761 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.15■□□□□ 0.66
CLK3P49761 AC112907.3-201ENST00000577781 2400 ntBASIC19.15■□□□□ 0.66
CLK3P49761 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.15■□□□□ 0.66
CLK3P49761 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CLK3P49761 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.15■□□□□ 0.66
CLK3P49761 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK3P49761 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.15■□□□□ 0.66
CLK3P49761 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLK3P49761 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.15■□□□□ 0.66
CLK3P49761 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.15■□□□□ 0.66
CLK3P49761 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.15■□□□□ 0.66
CLK3P49761 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.15■□□□□ 0.66
CLK3P49761 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.15■□□□□ 0.66
CLK3P49761 AC022517.1-201ENST00000592429 346 ntBASIC19.15■□□□□ 0.66
CLK3P49761 UBE2DNL-204ENST00000602536 740 ntBASIC19.15■□□□□ 0.66
CLK3P49761 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK3P49761 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK3P49761 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.15■□□□□ 0.66
CLK3P49761 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLK3P49761 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms