Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CENPAP49450 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CENPAP49450 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CENPAP49450 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.33■□□□□ 0.53
CENPAP49450 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CENPAP49450 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CENPAP49450 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.33■□□□□ 0.53
CENPAP49450 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CENPAP49450 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CENPAP49450 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.33■□□□□ 0.52
CENPAP49450 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.33■□□□□ 0.52
CENPAP49450 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CENPAP49450 DUX4L2-201ENST00000561772 1275 ntBASIC18.33■□□□□ 0.52
CENPAP49450 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
CENPAP49450 DUX4L6-201ENST00000626483 1275 ntBASIC18.33■□□□□ 0.52
CENPAP49450 DUX4L1-201ENST00000627662 1275 ntBASIC18.33■□□□□ 0.52
CENPAP49450 DUX4L8-201ENST00000629013 1275 ntBASIC18.33■□□□□ 0.52
CENPAP49450 DUX4L3-201ENST00000630187 1275 ntBASIC18.33■□□□□ 0.52
CENPAP49450 DUX4L7-201ENST00000630678 1275 ntBASIC18.33■□□□□ 0.52
CENPAP49450 DUX4L5-201ENST00000630834 1275 ntBASIC18.33■□□□□ 0.52
CENPAP49450 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
CENPAP49450 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CENPAP49450 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
CENPAP49450 AC020907.5-201ENST00000624372 1936 ntBASIC18.33■□□□□ 0.52
CENPAP49450 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPAP49450 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPAP49450 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CENPAP49450 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPAP49450 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPAP49450 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPAP49450 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CENPAP49450 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPAP49450 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPAP49450 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPAP49450 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CENPAP49450 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPAP49450 AC010141.2-201ENST00000452426 721 ntBASIC18.32■□□□□ 0.52
CENPAP49450 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPAP49450 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.32■□□□□ 0.52
CENPAP49450 AP001160.3-201ENST00000601484 763 ntBASIC18.32■□□□□ 0.52
CENPAP49450 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.32■□□□□ 0.52
CENPAP49450 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.32■□□□□ 0.52
CENPAP49450 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPAP49450 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPAP49450 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPAP49450 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPAP49450 AC027702.1-201ENST00000563810 1770 ntBASIC18.32■□□□□ 0.52
CENPAP49450 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.32■□□□□ 0.52
CENPAP49450 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPAP49450 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CENPAP49450 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPAP49450 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPAP49450 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CENPAP49450 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPAP49450 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPAP49450 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CENPAP49450 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
CENPAP49450 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CENPAP49450 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPAP49450 AC123595.1-201ENST00000440769 1046 ntBASIC18.31■□□□□ 0.52
CENPAP49450 YBX1P1-201ENST00000445822 960 ntBASIC18.31■□□□□ 0.52
CENPAP49450 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPAP49450 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.31■□□□□ 0.52
CENPAP49450 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 SLC7A5P2-201ENST00000553010 536 ntBASIC18.31■□□□□ 0.52
CENPAP49450 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.31■□□□□ 0.52
CENPAP49450 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.31■□□□□ 0.52
CENPAP49450 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.31■□□□□ 0.52
CENPAP49450 BCL2-203ENST00000589955 5011 ntBASIC18.31■□□□□ 0.52
CENPAP49450 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CENPAP49450 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPAP49450 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPAP49450 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPAP49450 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPAP49450 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPAP49450 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CENPAP49450 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPAP49450 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPAP49450 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CENPAP49450 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.3■□□□□ 0.52
CENPAP49450 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.3■□□□□ 0.52
CENPAP49450 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.3■□□□□ 0.52
CENPAP49450 KRT18P14-201ENST00000534205 1250 ntBASIC18.3■□□□□ 0.52
CENPAP49450 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CENPAP49450 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.3■□□□□ 0.52
CENPAP49450 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CENPAP49450 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPAP49450 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPAP49450 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPAP49450 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CENPAP49450 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms