Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 YGL149WYGL149W 306 nt2.68□□□□□ -1.98
RFX1P48743 TIM13YGR181W 318 nt2.68□□□□□ -1.98
RFX1P48743 TAR1YLR154W-C 375 nt2.68□□□□□ -1.98
RFX1P48743 OSW7YFR039C 1533 nt2.68□□□□□ -1.98
RFX1P48743 YJL015CYJL015C 285 nt2.67□□□□□ -1.98
RFX1P48743 HCH1YNL281W 462 nt2.67□□□□□ -1.98
RFX1P48743 YPL152W-AYPL152W-A 99 nt2.67□□□□□ -1.98
RFX1P48743 snR51snR51 107 nt2.67□□□□□ -1.98
RFX1P48743 DNL4YOR005C 2835 nt2.67□□□□□ -1.98
RFX1P48743 KAR3YPR141C 2190 nt2.67□□□□□ -1.98
RFX1P48743 TOR1YJR066W 7413 nt2.67□□□□□ -1.98
RFX1P48743 MMS1YPR164W 4224 nt2.66□□□□□ -1.98
RFX1P48743 YGL014C-AYGL014C-A 162 nt2.66□□□□□ -1.98
RFX1P48743 LSO2YGR169C-A 279 nt2.66□□□□□ -1.98
RFX1P48743 tW(CCA)G1tW(CCA)G1 72 nt2.66□□□□□ -1.98
RFX1P48743 tW(CCA)G2tW(CCA)G2 72 nt2.66□□□□□ -1.98
RFX1P48743 tW(CCA)JtW(CCA)J 72 nt2.66□□□□□ -1.98
RFX1P48743 tW(CCA)KtW(CCA)K 72 nt2.66□□□□□ -1.98
RFX1P48743 tW(CCA)MtW(CCA)M 72 nt2.66□□□□□ -1.98
RFX1P48743 tW(CCA)PtW(CCA)P 72 nt2.66□□□□□ -1.98
RFX1P48743 SWR1YDR334W 4545 nt2.66□□□□□ -1.98
RFX1P48743 PTP3YER075C 2787 nt2.66□□□□□ -1.98
RFX1P48743 RPL35AYDL191W 363 nt2.65□□□□□ -1.99
RFX1P48743 YBR121C-AYBR121C-A 159 nt2.65□□□□□ -1.99
RFX1P48743 PDR1YGL013C 3207 nt2.64□□□□□ -1.99
RFX1P48743 BNR1YIL159W 4128 nt2.64□□□□□ -1.99
RFX1P48743 KSP1YHR082C 3090 nt2.64□□□□□ -1.99
RFX1P48743 YGL024WYGL024W 336 nt2.64□□□□□ -1.99
RFX1P48743 YGR265WYGR265W 411 nt2.64□□□□□ -1.99
RFX1P48743 IPT1YDR072C 1584 nt2.64□□□□□ -1.99
RFX1P48743 SAK1YER129W 3429 nt2.64□□□□□ -1.99
RFX1P48743 RLI1YDR091C 1827 nt2.63□□□□□ -1.99
RFX1P48743 YDL025W-AYDL025W-A 105 nt2.63□□□□□ -1.99
RFX1P48743 QCR7YDR529C 384 nt2.63□□□□□ -1.99
RFX1P48743 YHR032W-AYHR032W-A 180 nt2.63□□□□□ -1.99
RFX1P48743 YOP1YPR028W 543 nt2.63□□□□□ -1.99
RFX1P48743 DIS3YOL021C 3006 nt2.63□□□□□ -1.99
RFX1P48743 YDR098C-BYDR098C-B 5268 nt2.62□□□□□ -1.99
RFX1P48743 YDR210C-DYDR210C-D 5268 nt2.62□□□□□ -1.99
RFX1P48743 YDR316W-BYDR316W-B 5268 nt2.62□□□□□ -1.99
RFX1P48743 YDR365W-BYDR365W-B 5268 nt2.62□□□□□ -1.99
RFX1P48743 YER138CYER138C 5268 nt2.62□□□□□ -1.99
RFX1P48743 YER160CYER160C 5268 nt2.62□□□□□ -1.99
RFX1P48743 YGR038C-BYGR038C-B 5268 nt2.62□□□□□ -1.99
RFX1P48743 YGR161C-DYGR161C-D 5268 nt2.62□□□□□ -1.99
RFX1P48743 YJR027WYJR027W 5268 nt2.62□□□□□ -1.99
RFX1P48743 YLR157C-BYLR157C-B 5268 nt2.62□□□□□ -1.99
RFX1P48743 YML039WYML039W 5268 nt2.62□□□□□ -1.99
RFX1P48743 YML045WYML045W 5268 nt2.62□□□□□ -1.99
RFX1P48743 YMR050CYMR050C 5268 nt2.62□□□□□ -1.99
RFX1P48743 YOL103W-BYOL103W-B 5268 nt2.62□□□□□ -1.99
RFX1P48743 YBR012W-BYBR012W-B 5271 nt2.62□□□□□ -1.99
RFX1P48743 YOR142W-BYOR142W-B 5268 nt2.62□□□□□ -1.99
RFX1P48743 YPL257W-BYPL257W-B 5268 nt2.62□□□□□ -1.99
RFX1P48743 YPR158W-BYPR158W-B 5271 nt2.62□□□□□ -1.99
RFX1P48743 NCL1YBL024W 2055 nt2.62□□□□□ -1.99
RFX1P48743 YJL070CYJL070C 2667 nt2.62□□□□□ -1.99
RFX1P48743 YPR089WYPR089W 2667 nt2.62□□□□□ -1.99
RFX1P48743 MET6YER091C 2304 nt2.62□□□□□ -1.99
RFX1P48743 CSN9YDR179C 489 nt2.62□□□□□ -1.99
RFX1P48743 tM(CAU)Q1tM(CAU)Q1 76 nt2.62□□□□□ -1.99
RFX1P48743 RPS27AYKL156W 249 nt2.62□□□□□ -1.99
RFX1P48743 LSM7YNL147W 348 nt2.62□□□□□ -1.99
RFX1P48743 RPL32YBL092W 393 nt2.62□□□□□ -1.99
RFX1P48743 MPH1YIR002C 2982 nt2.62□□□□□ -1.99
RFX1P48743 DUG2YBR281C 2637 nt2.62□□□□□ -1.99
RFX1P48743 PTC5YOR090C 1719 nt2.62□□□□□ -1.99
RFX1P48743 PAC1YOR269W 1485 nt2.61□□□□□ -1.99
RFX1P48743 YER079C-AYER079C-A 339 nt2.61□□□□□ -1.99
RFX1P48743 HTB2YBL002W 396 nt2.61□□□□□ -1.99
RFX1P48743 GRX8YLR364W 330 nt2.61□□□□□ -1.99
RFX1P48743 JLP2YMR132C 627 nt2.61□□□□□ -1.99
RFX1P48743 YMR194C-AYMR194C-A 225 nt2.61□□□□□ -1.99
RFX1P48743 FKS3YMR306W 5358 nt2.6□□□□□ -1.99
RFX1P48743 NUP120YKL057C 3114 nt2.6□□□□□ -1.99
RFX1P48743 SLN1YIL147C 3663 nt2.6□□□□□ -1.99
RFX1P48743 HTL1YCR020W-B 237 nt2.6□□□□□ -1.99
RFX1P48743 YDR344CYDR344C 444 nt2.6□□□□□ -1.99
RFX1P48743 CYC7YEL039C 342 nt2.6□□□□□ -1.99
RFX1P48743 YNL337WYNL337W 255 nt2.6□□□□□ -1.99
RFX1P48743 RTC6YPL183W-A 282 nt2.6□□□□□ -1.99
RFX1P48743 UBP11YKR098C 2154 nt2.6□□□□□ -1.99
RFX1P48743 SGD1YLR336C 2700 nt2.59□□□□□ -1.99
RFX1P48743 YKL183C-AYKL183C-A 213 nt2.59□□□□□ -1.99
RFX1P48743 OSH6YKR003W 1347 nt2.59□□□□□ -2
RFX1P48743 DOT6YER088C 2013 nt2.59□□□□□ -2
RFX1P48743 PRP6YBR055C 2700 nt2.59□□□□□ -2
RFX1P48743 GEA1YJR031C 4227 nt2.59□□□□□ -2
RFX1P48743 PDR3YBL005W 2931 nt2.58□□□□□ -2
RFX1P48743 RBK1YCR036W 1002 nt2.58□□□□□ -2
RFX1P48743 KTI11YBL071W-A 249 nt2.58□□□□□ -2
RFX1P48743 FPR1YNL135C 345 nt2.58□□□□□ -2
RFX1P48743 MRD1YPR112C 2664 nt2.58□□□□□ -2
RFX1P48743 TRA1YHR099W 11235 nt2.58□□□□□ -2
RFX1P48743 GCV2YMR189W 3105 nt2.57□□□□□ -2
RFX1P48743 FIR1YER032W 2631 nt2.57□□□□□ -2
RFX1P48743 UTP14YML093W 2700 nt2.57□□□□□ -2
RFX1P48743 NEW1YPL226W 3591 nt2.57□□□□□ -2
RFX1P48743 snR70snR70 164 nt2.57□□□□□ -2
RFX1P48743 YGL188C-AYGL188C-A 141 nt2.57□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms