Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
KRT6CP48668 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.67■□□□□ 0.74
KRT6CP48668 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT6CP48668 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
KRT6CP48668 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
KRT6CP48668 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.66■□□□□ 0.74
KRT6CP48668 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.66■□□□□ 0.74
KRT6CP48668 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.66■□□□□ 0.74
KRT6CP48668 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 KRT18P61-201ENST00000585825 1298 ntBASIC19.66■□□□□ 0.74
KRT6CP48668 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.66■□□□□ 0.74
KRT6CP48668 FAM21FP-204ENST00000608637 956 ntBASIC19.66■□□□□ 0.74
KRT6CP48668 MYCNOS-205ENST00000641950 531 ntBASIC19.66■□□□□ 0.74
KRT6CP48668 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6CP48668 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6CP48668 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT6CP48668 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
KRT6CP48668 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
KRT6CP48668 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6CP48668 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
KRT6CP48668 AC034268.1-201ENST00000441047 882 ntBASIC19.65■□□□□ 0.74
KRT6CP48668 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT6CP48668 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6CP48668 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6CP48668 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6CP48668 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6CP48668 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6CP48668 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6CP48668 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.65■□□□□ 0.74
KRT6CP48668 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
KRT6CP48668 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
KRT6CP48668 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.64■□□□□ 0.74
KRT6CP48668 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRT6CP48668 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT6CP48668 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6CP48668 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.64■□□□□ 0.73
KRT6CP48668 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6CP48668 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT6CP48668 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KRT6CP48668 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.64■□□□□ 0.73
KRT6CP48668 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6CP48668 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.64■□□□□ 0.73
KRT6CP48668 NTF6G-201ENST00000591094 616 ntBASIC19.64■□□□□ 0.73
KRT6CP48668 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6CP48668 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6CP48668 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6CP48668 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6CP48668 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
KRT6CP48668 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6CP48668 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6CP48668 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
KRT6CP48668 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT6CP48668 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6CP48668 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KRT6CP48668 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
KRT6CP48668 AL391422.3-201ENST00000603791 2761 ntBASIC19.64■□□□□ 0.73
KRT6CP48668 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT6CP48668 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KRT6CP48668 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT6CP48668 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.63■□□□□ 0.73
KRT6CP48668 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
KRT6CP48668 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KRT6CP48668 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6CP48668 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.63■□□□□ 0.73
KRT6CP48668 AC099778.1-201ENST00000568593 1911 ntBASIC19.63■□□□□ 0.73
KRT6CP48668 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT6CP48668 AIRN-201ENST00000601203 4374 ntBASIC19.62■□□□□ 0.73
KRT6CP48668 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
KRT6CP48668 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms