Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SMG8-203ENST00000578922 2178 ntBASIC17.83■□□□□ 0.45
SOX2P48431 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SOX2P48431 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.83■□□□□ 0.45
SOX2P48431 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.83■□□□□ 0.44
SOX2P48431 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX2P48431 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX2P48431 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX2P48431 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SOX2P48431 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.83■□□□□ 0.44
SOX2P48431 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.83■□□□□ 0.44
SOX2P48431 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.83■□□□□ 0.44
SOX2P48431 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SOX2P48431 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX2P48431 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.83■□□□□ 0.44
SOX2P48431 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.83■□□□□ 0.44
SOX2P48431 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SOX2P48431 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.83■□□□□ 0.44
SOX2P48431 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SOX2P48431 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SOX2P48431 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SOX2P48431 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SOX2P48431 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SOX2P48431 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.82■□□□□ 0.44
SOX2P48431 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.82■□□□□ 0.44
SOX2P48431 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.82■□□□□ 0.44
SOX2P48431 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX2P48431 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.81■□□□□ 0.44
SOX2P48431 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX2P48431 RASA4CP-201ENST00000424092 1398 ntBASIC17.81■□□□□ 0.44
SOX2P48431 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SOX2P48431 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.81■□□□□ 0.44
SOX2P48431 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.81■□□□□ 0.44
SOX2P48431 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SOX2P48431 POU5F1P4-201ENST00000413175 1085 ntBASIC17.81■□□□□ 0.44
SOX2P48431 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.81■□□□□ 0.44
SOX2P48431 AF213884.3-201ENST00000563833 479 ntBASIC17.81■□□□□ 0.44
SOX2P48431 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.81■□□□□ 0.44
SOX2P48431 AC106739.1-201ENST00000617035 715 ntBASIC17.81■□□□□ 0.44
SOX2P48431 RARRES2P11-201ENST00000635158 484 ntBASIC17.81■□□□□ 0.44
SOX2P48431 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.81■□□□□ 0.44
SOX2P48431 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SOX2P48431 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
SOX2P48431 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX2P48431 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SOX2P48431 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX2P48431 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX2P48431 AC008406.3-201ENST00000620001 1374 ntBASIC17.8■□□□□ 0.44
SOX2P48431 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.8■□□□□ 0.44
SOX2P48431 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX2P48431 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX2P48431 EDA-201ENST00000338901 1233 ntBASIC17.8■□□□□ 0.44
SOX2P48431 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.8■□□□□ 0.44
SOX2P48431 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX2P48431 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.8■□□□□ 0.44
SOX2P48431 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.8■□□□□ 0.44
SOX2P48431 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX2P48431 AC012414.1-201ENST00000556676 535 ntBASIC17.8■□□□□ 0.44
SOX2P48431 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX2P48431 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.8■□□□□ 0.44
SOX2P48431 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX2P48431 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX2P48431 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX2P48431 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX2P48431 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX2P48431 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX2P48431 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SOX2P48431 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX2P48431 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX2P48431 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX2P48431 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SOX2P48431 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms