Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SLC6A4P31645 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A4P31645 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC6A4P31645 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A4P31645 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A4P31645 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC6A4P31645 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC6A4P31645 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC6A4P31645 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A4P31645 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A4P31645 AC008403.3-201ENST00000598924 454 ntBASIC20.9■□□□□ 0.94
SLC6A4P31645 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A4P31645 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A4P31645 AC007225.1-201ENST00000566331 1836 ntBASIC20.9■□□□□ 0.94
SLC6A4P31645 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC6A4P31645 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC6A4P31645 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A4P31645 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A4P31645 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SLC6A4P31645 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A4P31645 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC6A4P31645 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
SLC6A4P31645 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC6A4P31645 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC6A4P31645 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC6A4P31645 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC6A4P31645 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A4P31645 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A4P31645 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC6A4P31645 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC6A4P31645 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A4P31645 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC6A4P31645 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A4P31645 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SLC6A4P31645 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A4P31645 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC6A4P31645 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A4P31645 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC6A4P31645 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A4P31645 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A4P31645 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC6A4P31645 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A4P31645 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A4P31645 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A4P31645 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC6A4P31645 AP003097.1-201ENST00000530657 1135 ntBASIC20.88■□□□□ 0.93
SLC6A4P31645 TMEM191A-211ENST00000637163 1067 ntBASIC20.88■□□□□ 0.93
SLC6A4P31645 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A4P31645 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A4P31645 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A4P31645 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC6A4P31645 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A4P31645 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC6A4P31645 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A4P31645 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A4P31645 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SLC6A4P31645 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A4P31645 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC6A4P31645 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A4P31645 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A4P31645 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SLC6A4P31645 AC026366.1-201ENST00000488803 879 ntBASIC20.87■□□□□ 0.93
SLC6A4P31645 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC6A4P31645 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC6A4P31645 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.87■□□□□ 0.93
SLC6A4P31645 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC6A4P31645 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A4P31645 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SLC6A4P31645 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A4P31645 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC6A4P31645 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
SLC6A4P31645 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC6A4P31645 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLC6A4P31645 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC6A4P31645 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC6A4P31645 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC6A4P31645 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SLC6A4P31645 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SLC6A4P31645 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC6A4P31645 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms