Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.51■□□□□ 0.39
CCL1P22362 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.51■□□□□ 0.39
CCL1P22362 AL162412.1-201ENST00000567129 965 ntBASIC17.51■□□□□ 0.39
CCL1P22362 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.51■□□□□ 0.39
CCL1P22362 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL1P22362 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL1P22362 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL1P22362 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL1P22362 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL1P22362 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL1P22362 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL1P22362 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.51■□□□□ 0.39
CCL1P22362 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.51■□□□□ 0.39
CCL1P22362 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCL1P22362 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL1P22362 TERF1P5-201ENST00000477545 1207 ntBASIC17.5■□□□□ 0.39
CCL1P22362 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.5■□□□□ 0.39
CCL1P22362 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.5■□□□□ 0.39
CCL1P22362 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.5■□□□□ 0.39
CCL1P22362 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.5■□□□□ 0.39
CCL1P22362 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCL1P22362 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCL1P22362 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.49■□□□□ 0.39
CCL1P22362 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 BX119927.1-201ENST00000636596 1552 ntBASIC17.49■□□□□ 0.39
CCL1P22362 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCL1P22362 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.49■□□□□ 0.39
CCL1P22362 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 AC007322.4-201ENST00000509611 723 ntBASIC17.49■□□□□ 0.39
CCL1P22362 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.49■□□□□ 0.39
CCL1P22362 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.49■□□□□ 0.39
CCL1P22362 AL591742.1-201ENST00000604433 565 ntBASIC17.49■□□□□ 0.39
CCL1P22362 AL356652.1-201ENST00000615962 565 ntBASIC17.49■□□□□ 0.39
CCL1P22362 AC010536.3-201ENST00000620306 533 ntBASIC17.49■□□□□ 0.39
CCL1P22362 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.49■□□□□ 0.39
CCL1P22362 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.49■□□□□ 0.39
CCL1P22362 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.49■□□□□ 0.39
CCL1P22362 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.49■□□□□ 0.39
CCL1P22362 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.49■□□□□ 0.39
CCL1P22362 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL1P22362 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL1P22362 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CCL1P22362 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL1P22362 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL1P22362 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL1P22362 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL1P22362 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCL1P22362 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL1P22362 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL1P22362 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL1P22362 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCL1P22362 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL1P22362 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CCL1P22362 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL1P22362 NTF6G-201ENST00000591094 616 ntBASIC17.48■□□□□ 0.39
CCL1P22362 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.48■□□□□ 0.39
CCL1P22362 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL1P22362 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL1P22362 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL1P22362 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL1P22362 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL1P22362 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL1P22362 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CCL1P22362 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCL1P22362 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL1P22362 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL1P22362 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL1P22362 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL1P22362 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
CCL1P22362 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL1P22362 AC034268.1-201ENST00000441047 882 ntBASIC17.47■□□□□ 0.39
CCL1P22362 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCL1P22362 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.47■□□□□ 0.39
CCL1P22362 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.47■□□□□ 0.39
CCL1P22362 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL1P22362 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL1P22362 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL1P22362 CYP21A1P-202ENST00000354927 1481 ntBASIC17.47■□□□□ 0.39
CCL1P22362 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCL1P22362 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL1P22362 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL1P22362 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL1P22362 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCL1P22362 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL1P22362 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCL1P22362 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL1P22362 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL1P22362 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL1P22362 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms