Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.14■■□□□ 1.61
KCNA3P22001 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
KCNA3P22001 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
KCNA3P22001 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
KCNA3P22001 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.13■■□□□ 1.61
KCNA3P22001 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KCNA3P22001 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
KCNA3P22001 GUK1-204ENST00000366721 689 ntTSL 3 BASIC25.13■■□□□ 1.61
KCNA3P22001 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.13■■□□□ 1.61
KCNA3P22001 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.13■■□□□ 1.61
KCNA3P22001 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.13■■□□□ 1.61
KCNA3P22001 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.13■■□□□ 1.61
KCNA3P22001 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KCNA3P22001 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KCNA3P22001 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KCNA3P22001 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KCNA3P22001 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
KCNA3P22001 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
KCNA3P22001 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
KCNA3P22001 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.12■■□□□ 1.61
KCNA3P22001 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
KCNA3P22001 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KCNA3P22001 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
KCNA3P22001 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KCNA3P22001 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
KCNA3P22001 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
KCNA3P22001 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
KCNA3P22001 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KCNA3P22001 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.12■■□□□ 1.61
KCNA3P22001 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.12■■□□□ 1.61
KCNA3P22001 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KCNA3P22001 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
KCNA3P22001 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KCNA3P22001 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
KCNA3P22001 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC25.11■■□□□ 1.61
KCNA3P22001 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
KCNA3P22001 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
KCNA3P22001 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KCNA3P22001 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.11■■□□□ 1.61
KCNA3P22001 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.11■■□□□ 1.61
KCNA3P22001 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.11■■□□□ 1.61
KCNA3P22001 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
KCNA3P22001 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
KCNA3P22001 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.11■■□□□ 1.61
KCNA3P22001 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
KCNA3P22001 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KCNA3P22001 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
KCNA3P22001 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KCNA3P22001 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
KCNA3P22001 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
KCNA3P22001 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.1■■□□□ 1.61
KCNA3P22001 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
KCNA3P22001 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KCNA3P22001 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
KCNA3P22001 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
KCNA3P22001 AP002982.1-201ENST00000492365 877 ntBASIC25.1■■□□□ 1.61
KCNA3P22001 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC25.1■■□□□ 1.61
KCNA3P22001 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.1■■□□□ 1.61
KCNA3P22001 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.1■■□□□ 1.61
KCNA3P22001 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.1■■□□□ 1.61
KCNA3P22001 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
KCNA3P22001 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
KCNA3P22001 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
KCNA3P22001 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.09■■□□□ 1.61
KCNA3P22001 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
KCNA3P22001 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KCNA3P22001 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KCNA3P22001 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC25.09■■□□□ 1.61
KCNA3P22001 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC25.09■■□□□ 1.61
KCNA3P22001 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.09■■□□□ 1.61
KCNA3P22001 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.09■■□□□ 1.61
KCNA3P22001 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.09■■□□□ 1.61
KCNA3P22001 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.09■■□□□ 1.61
KCNA3P22001 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.09■■□□□ 1.61
KCNA3P22001 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.09■■□□□ 1.61
KCNA3P22001 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.09■■□□□ 1.61
KCNA3P22001 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KCNA3P22001 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KCNA3P22001 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KCNA3P22001 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KCNA3P22001 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
KCNA3P22001 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KCNA3P22001 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
KCNA3P22001 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
KCNA3P22001 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.08■■□□□ 1.61
KCNA3P22001 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.08■■□□□ 1.61
KCNA3P22001 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.08■■□□□ 1.61
KCNA3P22001 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.08■■□□□ 1.61
KCNA3P22001 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.61
KCNA3P22001 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
KCNA3P22001 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KCNA3P22001 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
KCNA3P22001 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
KCNA3P22001 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
KCNA3P22001 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
KCNA3P22001 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.07■■□□□ 1.6
KCNA3P22001 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms