Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.92■□□□□ 0.78
HOXC4P09017 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HOXC4P09017 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.92■□□□□ 0.78
HOXC4P09017 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC4P09017 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC4P09017 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC4P09017 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC4P09017 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC4P09017 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC4P09017 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC4P09017 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HOXC4P09017 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC4P09017 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC4P09017 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC4P09017 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC4P09017 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC4P09017 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC4P09017 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC4P09017 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HOXC4P09017 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC4P09017 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC4P09017 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC4P09017 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC4P09017 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HOXC4P09017 RPS2P52-201ENST00000469610 820 ntBASIC19.91■□□□□ 0.78
HOXC4P09017 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXC4P09017 AC006557.6-201ENST00000623071 864 ntBASIC19.91■□□□□ 0.78
HOXC4P09017 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC4P09017 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC4P09017 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HOXC4P09017 AC006128.1-201ENST00000624704 1661 ntBASIC19.91■□□□□ 0.78
HOXC4P09017 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC4P09017 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC4P09017 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC4P09017 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC4P09017 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HOXC4P09017 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.9■□□□□ 0.78
HOXC4P09017 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HOXC4P09017 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
HOXC4P09017 AP006294.2-201ENST00000641667 209 ntBASIC19.9■□□□□ 0.78
HOXC4P09017 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC4P09017 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC4P09017 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HOXC4P09017 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC4P09017 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC4P09017 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC4P09017 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXC4P09017 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC4P09017 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC4P09017 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC4P09017 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC4P09017 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC4P09017 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC4P09017 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC4P09017 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.89■□□□□ 0.77
HOXC4P09017 AL359736.2-201ENST00000621992 437 ntBASIC19.89■□□□□ 0.77
HOXC4P09017 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HOXC4P09017 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC4P09017 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC4P09017 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HOXC4P09017 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXC4P09017 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC4P09017 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC4P09017 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.88■□□□□ 0.77
HOXC4P09017 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC4P09017 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
HOXC4P09017 UBE2SP1-201ENST00000450587 669 ntBASIC19.88■□□□□ 0.77
HOXC4P09017 RPPH1-201ENST00000516869 333 ntBASIC19.88■□□□□ 0.77
HOXC4P09017 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXC4P09017 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC4P09017 AC233263.1-201ENST00000578059 224 ntBASIC19.88■□□□□ 0.77
HOXC4P09017 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC4P09017 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC4P09017 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC4P09017 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXC4P09017 AF106564.1-201ENST00000607058 2553 ntBASIC19.88■□□□□ 0.77
HOXC4P09017 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXC4P09017 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXC4P09017 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.87■□□□□ 0.77
HOXC4P09017 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC4P09017 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC4P09017 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
HOXC4P09017 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC4P09017 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.87■□□□□ 0.77
HOXC4P09017 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HOXC4P09017 AL158047.1-201ENST00000445918 881 ntBASIC19.87■□□□□ 0.77
HOXC4P09017 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXC4P09017 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC4P09017 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
HOXC4P09017 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.87■□□□□ 0.77
HOXC4P09017 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.87■□□□□ 0.77
HOXC4P09017 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXC4P09017 MTDHP1-201ENST00000605323 784 ntBASIC19.87■□□□□ 0.77
HOXC4P09017 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC4P09017 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC4P09017 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HOXC4P09017 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC4P09017 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC4P09017 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXC4P09017 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms