Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ALDH1A2O94788 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A2O94788 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A2O94788 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ALDH1A2O94788 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.09■□□□□ 0.97
ALDH1A2O94788 AC245052.3-201ENST00000450182 901 ntBASIC21.09■□□□□ 0.97
ALDH1A2O94788 AC026366.1-201ENST00000488803 879 ntBASIC21.09■□□□□ 0.97
ALDH1A2O94788 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A2O94788 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.09■□□□□ 0.97
ALDH1A2O94788 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ALDH1A2O94788 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A2O94788 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A2O94788 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A2O94788 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A2O94788 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A2O94788 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ALDH1A2O94788 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A2O94788 AC006128.1-201ENST00000624704 1661 ntBASIC21.09■□□□□ 0.97
ALDH1A2O94788 PLK5-205ENST00000642079 1969 ntBASIC21.08■□□□□ 0.97
ALDH1A2O94788 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A2O94788 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.08■□□□□ 0.97
ALDH1A2O94788 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A2O94788 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A2O94788 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A2O94788 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ALDH1A2O94788 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ALDH1A2O94788 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.08■□□□□ 0.97
ALDH1A2O94788 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A2O94788 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.08■□□□□ 0.97
ALDH1A2O94788 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.08■□□□□ 0.97
ALDH1A2O94788 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A2O94788 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.08■□□□□ 0.97
ALDH1A2O94788 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ALDH1A2O94788 UNC93B5-201ENST00000530315 699 ntBASIC21.08■□□□□ 0.97
ALDH1A2O94788 FAM21FP-204ENST00000608637 956 ntBASIC21.08■□□□□ 0.97
ALDH1A2O94788 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ALDH1A2O94788 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.08■□□□□ 0.96
ALDH1A2O94788 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ALDH1A2O94788 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A2O94788 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.07■□□□□ 0.96
ALDH1A2O94788 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A2O94788 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A2O94788 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
ALDH1A2O94788 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ALDH1A2O94788 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.07■□□□□ 0.96
ALDH1A2O94788 AP003097.1-201ENST00000530657 1135 ntBASIC21.07■□□□□ 0.96
ALDH1A2O94788 AC100791.3-201ENST00000617619 330 ntBASIC21.07■□□□□ 0.96
ALDH1A2O94788 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ALDH1A2O94788 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A2O94788 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A2O94788 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A2O94788 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ALDH1A2O94788 LINC01006-201ENST00000333319 2292 ntBASIC21.07■□□□□ 0.96
ALDH1A2O94788 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A2O94788 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A2O94788 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A2O94788 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A2O94788 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
ALDH1A2O94788 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A2O94788 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.06■□□□□ 0.96
ALDH1A2O94788 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A2O94788 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.06■□□□□ 0.96
ALDH1A2O94788 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.06■□□□□ 0.96
ALDH1A2O94788 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A2O94788 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.06■□□□□ 0.96
ALDH1A2O94788 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.06■□□□□ 0.96
ALDH1A2O94788 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.06■□□□□ 0.96
ALDH1A2O94788 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A2O94788 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A2O94788 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A2O94788 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ALDH1A2O94788 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ALDH1A2O94788 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A2O94788 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.06■□□□□ 0.96
ALDH1A2O94788 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A2O94788 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A2O94788 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ALDH1A2O94788 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A2O94788 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A2O94788 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ALDH1A2O94788 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.05■□□□□ 0.96
ALDH1A2O94788 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A2O94788 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A2O94788 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ALDH1A2O94788 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A2O94788 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A2O94788 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.05■□□□□ 0.96
ALDH1A2O94788 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.05■□□□□ 0.96
ALDH1A2O94788 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.05■□□□□ 0.96
ALDH1A2O94788 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ALDH1A2O94788 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A2O94788 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ALDH1A2O94788 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A2O94788 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A2O94788 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A2O94788 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A2O94788 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A2O94788 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A2O94788 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ALDH1A2O94788 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms