Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.53■□□□□ 0.88
USP1O94782 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 AC099778.1-201ENST00000568593 1911 ntBASIC20.53■□□□□ 0.88
USP1O94782 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP1O94782 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.52■□□□□ 0.88
USP1O94782 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP1O94782 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP1O94782 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.52■□□□□ 0.88
USP1O94782 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP1O94782 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
USP1O94782 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.52■□□□□ 0.88
USP1O94782 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP1O94782 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP1O94782 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
USP1O94782 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
USP1O94782 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.52■□□□□ 0.88
USP1O94782 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP1O94782 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.52■□□□□ 0.88
USP1O94782 AC034268.1-201ENST00000441047 882 ntBASIC20.52■□□□□ 0.88
USP1O94782 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.52■□□□□ 0.88
USP1O94782 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.52■□□□□ 0.88
USP1O94782 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
USP1O94782 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP1O94782 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP1O94782 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.52■□□□□ 0.88
USP1O94782 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
USP1O94782 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
USP1O94782 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
USP1O94782 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
USP1O94782 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.51■□□□□ 0.87
USP1O94782 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.51■□□□□ 0.87
USP1O94782 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
USP1O94782 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.51■□□□□ 0.87
USP1O94782 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.51■□□□□ 0.87
USP1O94782 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.51■□□□□ 0.87
USP1O94782 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 UBE2DNL-204ENST00000602536 740 ntBASIC20.51■□□□□ 0.87
USP1O94782 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
USP1O94782 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP1O94782 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP1O94782 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
USP1O94782 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
USP1O94782 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
USP1O94782 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP1O94782 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
USP1O94782 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.5■□□□□ 0.87
USP1O94782 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
USP1O94782 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP1O94782 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.5■□□□□ 0.87
USP1O94782 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.5■□□□□ 0.87
USP1O94782 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.5■□□□□ 0.87
USP1O94782 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
USP1O94782 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.5■□□□□ 0.87
USP1O94782 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP1O94782 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.5■□□□□ 0.87
USP1O94782 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP1O94782 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP1O94782 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.5■□□□□ 0.87
USP1O94782 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP1O94782 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.5■□□□□ 0.87
USP1O94782 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP1O94782 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP1O94782 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.49■□□□□ 0.87
USP1O94782 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.49■□□□□ 0.87
USP1O94782 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
USP1O94782 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP1O94782 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
USP1O94782 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.49■□□□□ 0.87
USP1O94782 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP1O94782 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP1O94782 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.49■□□□□ 0.87
USP1O94782 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
USP1O94782 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.49■□□□□ 0.87
USP1O94782 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP1O94782 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
USP1O94782 MYCNOS-205ENST00000641950 531 ntBASIC20.49■□□□□ 0.87
USP1O94782 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP1O94782 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP1O94782 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP1O94782 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP1O94782 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP1O94782 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP1O94782 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.48■□□□□ 0.87
USP1O94782 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.48■□□□□ 0.87
USP1O94782 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.48■□□□□ 0.87
USP1O94782 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP1O94782 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
USP1O94782 KRT8P36-201ENST00000489121 1440 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms